AT1G57560 (AtMYB50, MYB50)


Aliases : AtMYB50, MYB50

Description : myb domain protein 50


Gene families : OG_01_0000003 (Gene family) Phylogenetic Tree(s): OG0000003_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G57560
Cluster HCCA cluster: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01003662001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.04 Gene family
GSVIVT01027182001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
LOC_Os01g03720 Os01g0128000 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os02g02370 Os02g0114800 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
LOC_Os03g04900 Os03g0142600 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os03g56090 Os03g0771100 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os12g37690 Os12g0564100 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
MA_10157944g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.04 Gene family
MA_10432903g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
MA_10435612g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
MA_10436747g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
MA_14061g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
MA_37256g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
MA_6393g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc05g007710.3.1 Solyc05g007710.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc10g081490.2.1 Solyc10g081490.2 No description available 0.02 Gene family
Zm00001d014989 GRMZM2G088189 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d017268 GRMZM2G095904 27.3.25 RNA.regulation of transcription.MYB domain... 0.04 Gene family
Zm00001d018320 GRMZM5G848185 No description available 0.03 Gene family
Zm00001d038930 GRMZM2G069325 27.3.25 RNA.regulation of transcription.MYB domain... 0.04 Gene family
Zm00001d040594 GRMZM2G158700 27.3.25 RNA.regulation of transcription.MYB domain... 0.04 Gene family
Zm00001d041853 GRMZM2G041415 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Zm00001d043837 GRMZM5G849099 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Zm00001d047671 GRMZM2G022686 No description available 0.04 Gene family
Zm00001d051149 GRMZM2G127857 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
BP GO:0007165 signal transduction RCA Arabidopsis.org
BP GO:0009414 response to water deprivation RCA Arabidopsis.org
BP GO:0009723 response to ethylene RCA Arabidopsis.org
BP GO:0009733 response to auxin IEP Arabidopsis.org
BP GO:0009733 response to auxin RCA Arabidopsis.org
BP GO:0009738 abscisic acid-activated signaling pathway RCA Arabidopsis.org
BP GO:0009739 response to gibberellin IEP Arabidopsis.org
BP GO:0009751 response to salicylic acid IEP Arabidopsis.org
BP GO:0009753 response to jasmonic acid IEP Arabidopsis.org
BP GO:0009753 response to jasmonic acid RCA Arabidopsis.org
BP GO:0042538 hyperosmotic salinity response RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 67 110
No external refs found!