1. Home
  2. Species
  3. Nephrolepis biserrata
  4. Sequence
  5. Nbi_g12960

Nbi_g12960


Description : ROP-activating protein *(RenGAP) & original description: none


Gene families : OG0001811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001811_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g12960

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00063p00197920 evm_27.TU.AmTr_v1... Rho GTPase-activating protein 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT4G24580 REN1 Rho GTPase activation protein (RhoGAP) with PH domain 0.03 OrthoFinder output from all 47 species
AT5G19390 No alias Rho GTPase activation protein (RhoGAP) with PH domain 0.04 OrthoFinder output from all 47 species
Adi_g057671 No alias ROP-activating protein *(RenGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g105472 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20968 No alias ROP-activating protein *(RenGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11821 No alias ROP-activating protein *(RenGAP) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g11013 No alias ROP-activating protein *(RenGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11123 No alias ROP-activating protein *(RenGAP) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70602 No alias ROP-activating protein *(RenGAP) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene72859.t1 Aspi01Gene72859 ROP-activating protein *(RenGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0173.g055873 No alias ROP-activating protein *(RenGAP) & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g37461 No alias ROP-activating protein *(RenGAP) & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.11G041800.1 Ceric.11G041800 ROP-activating protein *(RenGAP) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g09456 No alias ROP-activating protein *(RenGAP) & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g01869 No alias ROP-activating protein *(RenGAP) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g01978 No alias ROP-activating protein *(RenGAP) & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g00934 No alias ROP-activating protein *(RenGAP) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g11071 No alias ROP-activating protein *(RenGAP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003597001 REN1 Rho GTPase-activating protein REN1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01009150001 No alias Rho GTPase-activating protein 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01009151001 REN1 Rho GTPase-activating protein REN1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01037287001 No alias Rho GTPase-activating protein 7 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os03g15180.1 REN1, LOC_Os03g15180 Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g24180.1 LOC_Os03g24180 Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os07g46450.1 LOC_Os07g46450 Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g39495 No alias ROP-activating protein *(RenGAP) & original description: none 0.04 OrthoFinder output from all 47 species
MA_181127g0010 No alias Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g16703 No alias ROP-activating protein *(RenGAP) & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g18594 No alias ROP-activating protein *(RenGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03788 No alias ROP-activating protein *(RenGAP) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29654 No alias ROP-activating protein *(RenGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02003 No alias ROP-activating protein *(RenGAP) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13925 No alias ROP-activating protein *(RenGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48662 No alias ROP-activating protein *(RenGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008570 No alias ROP-activating protein *(RenGAP) & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g26229 No alias ROP-activating protein *(RenGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g008770.3.1 Solyc01g008770 Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g01358 No alias ROP-activating protein *(RenGAP) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g30873 No alias ROP-activating protein *(RenGAP) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e029802_P002 REN1, Zm00001e029802 Rho GTPase-activating protein REN1 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Zm00001e036715_P004 REN1, Zm00001e036715 Rho GTPase-activating protein REN1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0004126 cytidine deaminase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006213 pyrimidine nucleoside metabolic process IEP HCCA
BP GO:0006216 cytidine catabolic process IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0009119 ribonucleoside metabolic process IEP HCCA
BP GO:0009164 nucleoside catabolic process IEP HCCA
BP GO:0009972 cytidine deamination IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP HCCA
BP GO:0042454 ribonucleoside catabolic process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046087 cytidine metabolic process IEP HCCA
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP HCCA
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP HCCA
BP GO:0046135 pyrimidine nucleoside catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072529 pyrimidine-containing compound catabolic process IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
BP GO:1901658 glycosyl compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000198 RhoGAP_dom 179 323
IPR001849 PH_domain 21 122
IPR025757 MIP1_Leuzipper 604 683
No external refs found!