AT1G56110 (NOP56)


Aliases : NOP56

Description : homolog of nucleolar protein NOP56


Gene families : OG_01_0004523 (Gene family) Phylogenetic Tree(s): OG0004523_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G56110
Cluster HCCA cluster: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001073.20 No alias 27.3.67 RNA.regulation of transcription.putative... 0.09 Gene family
Cre12.g525200 No alias 27.3.67 RNA.regulation of transcription.putative... 0.06 Gene family
GSVIVT01008506001 No alias 27.3.67 RNA.regulation of transcription.putative... 0.2 Gene family
LOC_Os03g22880 Os03g0352300 27.3.67 RNA.regulation of transcription.putative... 0.21 Gene family
MA_10434077g0010 No alias 27.3.67 RNA.regulation of transcription.putative... 0.03 Gene family
Smo167367 PACid_15418583 27.3.67 RNA.regulation of transcription.putative... 0.08 Gene family
Solyc01g100570.3.1 Solyc01g100570.3 27.3.67 RNA.regulation of transcription.putative... 0.2 Gene family
Zm00001d029174 GRMZM2G144995 27.3.67 RNA.regulation of transcription.putative... 0.13 Gene family
Zm00001d047472 GRMZM2G110233 29.2.2.3.1 protein.synthesis.ribosome... 0.11 Gene family

Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation RCA Arabidopsis.org
CC GO:0005618 cell wall IDA Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
CC GO:0005730 nucleolus IDA Arabidopsis.org
BP GO:0009220 pyrimidine ribonucleotide biosynthetic process RCA Arabidopsis.org
CC GO:0009506 plasmodesma IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002687 Nop_dom 177 409
IPR012974 NOP5_N 4 69
No external refs found!