AT1G08050


Description : Zinc finger (C3HC4-type RING finger) family protein


Gene families : OG_01_0000379 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000379_tree ,
OG_02_0000514 (LandPlants) Phylogenetic Tree(s): OG_02_0000514_tree ,
OG_03_0001859 (SeedPlants) Phylogenetic Tree(s): OG_03_0001859_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G08050
Cluster HCCA: Cluster_257

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00148p00068590 evm_27.TU.AmTr_v1... E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT3G54780 No alias Zinc finger (C3HC4-type RING finger) family protein 0.04 Archaeplastida
AT4G37890 EDA40 Zinc finger (C3HC4-type RING finger) family protein 0.03 Archaeplastida
GSVIVT01009240001 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01016259001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
LOC_Os06g05990.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g03270.1 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.07 Archaeplastida
LOC_Os10g32740.1 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os10g32760.1 No alias Probable E3 ubiquitin-protein ligase WAVH2... 0.04 Archaeplastida
MA_11225g0010 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_218345g0010 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Smo141910 No alias No description available 0.02 Archaeplastida
Solyc02g091710.3.1 No alias ubiquitin protein ligase (WAV3) 0.07 Archaeplastida
Solyc05g056140.4.1 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e000344_P001 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Zm00001e004621_P001 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Zm00001e008822_P002 No alias ubiquitin protein ligase (WAV3) 0.03 Archaeplastida
Zm00001e010994_P001 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e012729_P001 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e023647_P001 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e041206_P001 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
AMTR_s00148p00068590 evm_27.TU.AmTr_v1... E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana 0.02 LandPlants
GSVIVT01016259001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 LandPlants
LOC_Os08g03270.1 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.02 LandPlants
LOC_Os10g32740.1 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.02 LandPlants
LOC_Os10g32760.1 No alias Probable E3 ubiquitin-protein ligase WAVH2... 0.04 LandPlants
MA_7835328g0010 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 LandPlants
Zm00001e000344_P001 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.06 LandPlants
Zm00001e004621_P001 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.07 LandPlants
Zm00001e010994_P001 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.04 LandPlants
AMTR_s00032p00153800 evm_27.TU.AmTr_v1... E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana 0.02 SeedPlants
AMTR_s00148p00068590 evm_27.TU.AmTr_v1... E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana 0.02 SeedPlants
Solyc11g069600.2.1 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.02 SeedPlants

Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade RCA Interproscan
MF GO:0004842 ubiquitin-protein transferase activity ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006499 N-terminal protein myristoylation RCA Interproscan
BP GO:0006612 protein targeting to membrane RCA Interproscan
BP GO:0007154 cell communication RCA Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
BP GO:0009409 response to cold RCA Interproscan
BP GO:0009627 systemic acquired resistance RCA Interproscan
BP GO:0009690 cytokinin metabolic process RCA Interproscan
BP GO:0009697 salicylic acid biosynthetic process RCA Interproscan
BP GO:0009738 abscisic acid-activated signaling pathway RCA Interproscan
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway RCA Interproscan
BP GO:0009867 jasmonic acid mediated signaling pathway RCA Interproscan
BP GO:0010363 regulation of plant-type hypersensitive response RCA Interproscan
BP GO:0030968 endoplasmic reticulum unfolded protein response RCA Interproscan
BP GO:0031348 negative regulation of defense response RCA Interproscan
BP GO:0043069 negative regulation of programmed cell death RCA Interproscan
BP GO:0050832 defense response to fungus RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 69 98
IPR032838 Vwaint_dom 551 623
IPR002035 VWF_A 204 378
No external refs found!