AT1G55490 (CPN60B, LEN1)


Aliases : CPN60B, LEN1

Description : chaperonin 60 beta


Gene families : OG_01_0000305 (Gene family) Phylogenetic Tree(s): OG0000305_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G55490
Cluster HCCA cluster: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001269.7 No alias 29.6 protein.folding mitochondrial chaperonin HSP.... 0.01 Gene family
Cre04.g231222 No alias 1.3.13 PS.calvin cycle.rubisco interacting Encodes... 0.07 Gene family
Cre07.g339150 No alias 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.05 Gene family
Cre17.g741450 No alias 1.3.13 PS.calvin cycle.rubisco interacting encodes the... 0.11 Gene family
GSVIVT01010149001 No alias 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.02 Gene family
GSVIVT01025490001 No alias 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.04 Gene family
GSVIVT01029025001 No alias 29.6 protein.folding mitochondrial chaperonin HSP.... 0.02 Gene family
LOC_Os12g17910 Os12g0277500 1.3.13 PS.calvin cycle.rubisco interacting Encodes... 0.1 Gene family
Smo168153 PACid_15419933 No description available 0.02 Gene family
Solyc01g028810.3.1 Solyc01g028810.3 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.02 Gene family
Solyc03g120850.3.1 Solyc03g120850.3 No description available 0.17 Gene family
Solyc05g010240.3.1 Solyc05g010240.3 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.02 Gene family
Solyc11g069790.2.1 Solyc11g069790.2 1.3.13 PS.calvin cycle.rubisco interacting Encodes... 0.04 Gene family
Zm00001d000399 No alias 1.3.13 PS.calvin cycle.rubisco interacting Encodes... 0.11 Gene family
Zm00001d028409 GRMZM2G042253 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.06 Gene family
Zm00001d034919 GRMZM2G434173 1.3.13 PS.calvin cycle.rubisco interacting Encodes... 0.02 Gene family
Zm00001d035937 GRMZM2G095252,... No description available 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005886 plasma membrane IDA Arabidopsis.org
BP GO:0006457 protein folding TAS Arabidopsis.org
BP GO:0008219 cell death IMP Arabidopsis.org
BP GO:0009409 response to cold IEP Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
CC GO:0009507 chloroplast NAS Arabidopsis.org
CC GO:0009570 chloroplast stroma IDA Arabidopsis.org
BP GO:0009627 systemic acquired resistance IMP Arabidopsis.org
CC GO:0009941 chloroplast envelope IDA Arabidopsis.org
CC GO:0010319 stromule IDA Arabidopsis.org
CC GO:0016020 membrane IDA Arabidopsis.org
BP GO:0016117 carotenoid biosynthetic process RCA Arabidopsis.org
CC GO:0022626 cytosolic ribosome IDA Arabidopsis.org
CC GO:0048046 apoplast IDA Arabidopsis.org
BP GO:0051085 chaperone cofactor-dependent protein refolding IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 78 581
No external refs found!