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  5. Nbi_g12848

Nbi_g12848


Description : Trihelix-type transcription factor & original description: none


Gene families : OG0000970 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000970_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g12848

Target Alias Description ECC score Gene Family Method Actions
AT5G05550 No alias sequence-specific DNA binding transcription factors 0.04 OrthoFinder output from all 47 species
GSVIVT01017112001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.03 OrthoFinder output from all 47 species
MA_10433137g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g31055 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06377 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g122030.1.1 Solyc03g122030 transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
Tin_g31566 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 43 131
No external refs found!