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Nbi_g12842 (emb2184)


Aliases : emb2184

Description : component *(bL31c) of large plastid ribosomal-subunit proteome & original description: none


Gene families : OG0020957 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0020957_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g12842
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Aop_g39319 emb2184 component *(bL31c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 39 species
Dde_g22510 emb2184 component *(bL31c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 39 species
Ppi_g17917 emb2184 component *(bL31c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 39 species
Spa_g16064 emb2184 component *(bL31c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 39 species
Tin_g17383 emb2184 component *(bL31c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002150 Ribosomal_L31 79 143
No external refs found!