AT1G54540


Description : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family


Gene families : OG_01_0001644 (Gene family) Phylogenetic Tree(s): OG0001644_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G54540
Cluster HCCA cluster: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AT5G36970 NHL25 NDR1/HIN1-like 25 0.03 Gene family
GSVIVT01033199001 No alias No description available 0.03 Gene family
LOC_Os04g58090 Os04g0677300 35.1 not assigned.no ontology Late embryogenesis... 0.05 Gene family
MA_740280g0010 No alias No description available 0.02 Gene family
Solyc02g036480.1.1 Solyc02g036480.1 No description available 0.03 Gene family
Solyc02g081445.1.1 Solyc02g081445.1 No description available 0.04 Gene family
Zm00001d001832 GRMZM2G449094 35.1 not assigned.no ontology Late embryogenesis... 0.07 Gene family
Zm00001d032620 GRMZM2G093951 No description available 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Arabidopsis.org
CC GO:0005575 cellular_component ND Arabidopsis.org
BP GO:0008150 biological_process ND Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004864 LEA_2 112 205
No external refs found!