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  5. Nbi_g12709

Nbi_g12709


Description : not classified & original description: none


Gene families : OG0001232 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001232_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g12709

Target Alias Description ECC score Gene Family Method Actions
Ala_g06846 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g16334 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g16572 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46515.t1 Aspi01Gene46515 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0061.g034992 No alias not classified & original description: CDS=1177-2823 0.03 OrthoFinder output from all 47 species
Azfi_s0533.g076059 No alias not classified & original description: CDS=605-1729 0.05 OrthoFinder output from all 47 species
Ceric.03G087500.1 Ceric.03G087500 not classified & original description: pacid=50571448... 0.04 OrthoFinder output from all 47 species
Ceric.07G093700.1 Ceric.07G093700 not classified & original description: pacid=50626158... 0.02 OrthoFinder output from all 47 species
Dac_g16946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01027058001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os05g50910.1 LOC_Os05g50910 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g24513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g20340.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009119 No alias not classified & original description: CDS=313-2328 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0099.g019551 No alias not classified & original description: CDS=102-4175 0.03 OrthoFinder output from all 47 species
Smo428331 No alias No description available 0.02 OrthoFinder output from all 47 species
Spa_g04856 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12186 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13366 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20380 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR021480 Zinc_ribbon_12 1190 1230
No external refs found!