AT1G53800


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).


Gene families : OG_01_0003220 (Gene family) Phylogenetic Tree(s): OG0003220_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G53800
Cluster HCCA cluster: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01014224001 No alias 35.2 not assigned.unknown unknown protein BEST... 0.07 Gene family
GSVIVT01016660001 No alias 35.2 not assigned.unknown unknown protein BEST... 0.1 Gene family
LOC_Os10g12354 Os10g0198600 35.2 not assigned.unknown unknown protein BEST... 0.04 Gene family
MA_643462g0010 No alias 35.2 not assigned.unknown unknown protein BEST... 0.08 Gene family
Smo439642 PACid_15403187 35.2 not assigned.unknown unknown protein BEST... 0.04 Gene family
Solyc03g123700.3.1 Solyc03g123700.3 35.2 not assigned.unknown unknown protein BEST... 0.11 Gene family
Solyc12g014220.2.1 Solyc12g014220.2 35.2 not assigned.unknown unknown protein BEST... 0.03 Gene family
Zm00001d001847 GRMZM2G084928 35.2 not assigned.unknown unknown protein BEST... 0.08 Gene family
Zm00001d039190 GRMZM2G156765 35.2 not assigned.unknown unknown protein BEST... 0.06 Gene family

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane ISM Arabidopsis.org
BP GO:0008150 biological_process ND Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003611 NUMOD3 111 137
No external refs found!