AT1G53090 (SPA4)

Aliases : SPA4

Description : SPA1-related 4

Gene families : OG_01_0001970 (Gene family) Phylogenetic Tree(s): OG0001970_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G53090
Cluster HCCA cluster: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01019492001 No alias No description available 0.03 Gene family
Smo98534 PACid_15414457 No description available 0.05 Gene family
Solyc07g063120.3.1 Solyc07g063120.3 No description available 0.04 Gene family
Solyc08g081990.3.1 Solyc08g081990.3 No description available 0.04 Gene family
Solyc12g013840.2.1 Solyc12g013840.2 No description available 0.1 Gene family
Zm00001d011746 GRMZM2G061602 No description available 0.08 Gene family
Zm00001d043592 GRMZM2G079904 No description available 0.07 Gene family

Type GO Term Name Evidence Source
MF GO:0004871 obsolete signal transducer activity ISS
MF GO:0005515 protein binding IPI
CC GO:0005634 nucleus ISM
CC GO:0005834 heterotrimeric G-protein complex ISS
BP GO:0006281 DNA repair RCA
BP GO:0010100 negative regulation of photomorphogenesis RCA
MF GO:0042802 identical protein binding IPI
BP GO:0048608 reproductive structure development RCA
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex ISS
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 567 605
IPR001680 WD40_repeat 655 689
No external refs found!