1. Home
  2. Species
  3. Nephrolepis biserrata
  4. Sequence
  5. Nbi_g12577

Nbi_g12577


Description : bHLH-type transcription factor & original description: none


Gene families : OG0000321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000321_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g12577
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
Aev_g07613 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g29669 BHLH42, TT8 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g35688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38416 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g49839 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02137 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03657 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11381 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g71396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0387.g067575 No alias bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Cba_g03232 ZOU, RGE1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05380 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16576 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g70328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G032900.1 Ceric.07G032900 bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.09G088900.1 Ceric.09G088900 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.09G089000.1 Ceric.09G089000 bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.29G028600.1 Ceric.29G028600 not classified & original description: pacid=50624922... 0.03 OrthoFinder output from all 47 species
Ceric.31G055400.1 Ceric.31G055400 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g14161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g29260 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05687 BHLH100 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Gb_22275 BIM1 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Mp8g04130.1 BHLH100 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Msp_g07656 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g27912 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48319 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10054 EGL1, EGL3, ATMYC-2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06468 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28076 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c2_31440V3.1 ZOU, RGE1, Pp3c2_31440 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Sam_g13612 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo421249 LRL3 RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Spa_g17093 BEE3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g42092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53612 BIM2 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g15370 EGL1, EGL3, ATMYC-2 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g15496 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44143 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45468 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 138 189
No external refs found!