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  5. Nbi_g12534

Nbi_g12534 (TIF3E1, INT6,...)


Aliases : TIF3E1, INT6, ATEIF3E-1, INT-6, ATINT6, EIF3E

Description : component *(eIF3e) of eIF3 mRNA-to-PIC binding complex & original description: none


Gene families : OG0003899 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003899_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g12534

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000093.43 TIF3E1, INT6,... Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
Dac_g22935 TIF3E1, INT6,... component *(eIF3e) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Dcu_g01164 TIF3E1, INT6,... component *(eIF3e) of eIF3 mRNA-to-PIC binding complex &... 0.04 OrthoFinder output from all 47 species
GSVIVT01005045001 TIF3E1, INT6,... Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
Pir_g09568 TIF3E1, INT6,... component *(eIF3e) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Sam_g18402 No alias component *(eIF3e) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Solyc10g079880.2.1 TIF3E1, INT6,... component eIF3e of eIF3 mRNA-to-PIC binding complex 0.03 OrthoFinder output from all 47 species
Zm00001e009393_P005 TIF3E1, INT6,... component eIF3e of eIF3 mRNA-to-PIC binding complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR019010 eIF3e_N 5 137
IPR000717 PCI_dom 286 399
No external refs found!