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Nbi_g12531 (PTAC14)


Aliases : PTAC14

Description : cofactor of plastid-encoded RNA polymerase *(PAP7/TAC14) & original description: none


Gene families : OG0004603 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004603_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g12531
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT4G20130 PTAC14 plastid transcriptionally active 14 0.05 OrthoFinder output from all 47 species
Aspi01Gene25662.t1 PTAC14, Aspi01Gene25662 cofactor of plastid-encoded RNA polymerase *(PAP7/TAC14)... 0.03 OrthoFinder output from all 47 species
Ceric.04G027900.1 PTAC14, Ceric.04G027900 cofactor of plastid-encoded RNA polymerase *(PAP7/TAC14)... 0.04 OrthoFinder output from all 47 species
Mp7g10810.1 PTAC14 PAP7/TAC14 cofactor of plastid-encoded RNA polymerase 0.04 OrthoFinder output from all 47 species
Msp_g06604 PTAC14 cofactor of plastid-encoded RNA polymerase *(PAP7/TAC14)... 0.03 OrthoFinder output from all 47 species
Spa_g08271 PTAC14 cofactor of plastid-encoded RNA polymerase *(PAP7/TAC14)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001214 SET_dom 97 320
IPR015353 Rubisco_LSMT_subst-bd 402 462
No external refs found!