AT1G52150 (ICU4, ATHB15, ATHB-15, CNA)


Aliases : ICU4, ATHB15, ATHB-15, CNA

Description : Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein


Gene families : OG_01_0000594 (Gene family) Phylogenetic Tree(s): OG0000594_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G52150
Cluster HCCA cluster: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Smo77000 PACid_15415552 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Solyc08g066500.3.1 Solyc08g066500.3 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity TAS Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005634 nucleus ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
BP GO:0006995 cellular response to nitrogen starvation RCA Arabidopsis.org
BP GO:0007155 cell adhesion RCA Arabidopsis.org
BP GO:0009855 determination of bilateral symmetry IMP Arabidopsis.org
BP GO:0009855 determination of bilateral symmetry RCA Arabidopsis.org
BP GO:0009887 animal organ morphogenesis IMP Arabidopsis.org
BP GO:0009887 animal organ morphogenesis RCA Arabidopsis.org
BP GO:0009944 polarity specification of adaxial/abaxial axis RCA Arabidopsis.org
BP GO:0009965 leaf morphogenesis IMP Arabidopsis.org
BP GO:0010014 meristem initiation IMP Arabidopsis.org
BP GO:0010014 meristem initiation RCA Arabidopsis.org
BP GO:0010051 xylem and phloem pattern formation RCA Arabidopsis.org
BP GO:0010073 meristem maintenance RCA Arabidopsis.org
BP GO:0010073 meristem maintenance TAS Arabidopsis.org
BP GO:0010075 regulation of meristem growth IMP Arabidopsis.org
BP GO:0010075 regulation of meristem growth RCA Arabidopsis.org
BP GO:0010087 phloem or xylem histogenesis IMP Arabidopsis.org
BP GO:0010089 xylem development RCA Arabidopsis.org
BP GO:0010090 trichome morphogenesis RCA Arabidopsis.org
BP GO:0045010 actin nucleation RCA Arabidopsis.org
BP GO:0048263 determination of dorsal identity IMP Arabidopsis.org
BP GO:0048439 flower morphogenesis RCA Arabidopsis.org
BP GO:0048519 negative regulation of biological process RCA Arabidopsis.org
BP GO:0048765 root hair cell differentiation RCA Arabidopsis.org
BP GO:0071555 cell wall organization RCA Arabidopsis.org
BP GO:0080060 integument development IGI Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013978 MEKHLA 693 835
IPR002913 START_lipid-bd_dom 161 369
IPR001356 Homeobox_dom 17 75
No external refs found!