AMTR_s00007p00204170 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00007.181

Description : Vesicle trafficking.endomembrane trafficking.protein recycling.ubiquitylated cargo adaptors.TOM associated protein


Gene families : OG_01_0000369 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000369_tree ,
OG_02_0000606 (LandPlants) Phylogenetic Tree(s): OG_02_0000606_tree ,
OG_03_0004553 (SeedPlants) Phylogenetic Tree(s): OG_03_0004553_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00007p00204170
Cluster HCCA: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01035657001 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.04 Archaeplastida
Gb_06800 No alias TOM endomembrane trafficking associated protein 0.03 Archaeplastida
LOC_Os01g61030.1 No alias TOM endomembrane trafficking associated protein 0.02 Archaeplastida
MA_10426607g0010 No alias Hexokinase-2 OS=Solanum tuberosum (sp|q9sq76|hxk2_soltu : 105.0) 0.02 Archaeplastida
MA_12709g0010 No alias TOM endomembrane trafficking associated protein 0.02 Archaeplastida
Mp1g23050.1 No alias TOM endomembrane trafficking associated protein 0.03 Archaeplastida
Solyc04g063280.3.1 No alias TOM endomembrane trafficking associated protein 0.02 Archaeplastida
GSVIVT01035657001 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.04 LandPlants
Gb_06800 No alias TOM endomembrane trafficking associated protein 0.02 LandPlants
LOC_Os01g61030.1 No alias TOM endomembrane trafficking associated protein 0.02 LandPlants
Solyc08g068370.3.1 No alias TOM endomembrane trafficking associated protein 0.02 LandPlants
Gb_06800 No alias TOM endomembrane trafficking associated protein 0.02 SeedPlants
LOC_Os01g61030.1 No alias TOM endomembrane trafficking associated protein 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005622 intracellular anatomical structure IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004152 GAT_dom 189 273
IPR002014 VHS_dom 3 116
No external refs found!