AT1G51710 (UBP6, ATUBP6)


Aliases : UBP6, ATUBP6

Description : ubiquitin-specific protease 6


Gene families : OG_01_0003992 (Gene family) Phylogenetic Tree(s): OG0003992_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G51710
Cluster HCCA cluster: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
Cre17.g726050 No alias 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.06 Gene family
Smo157786 PACid_15414592 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.02 Gene family
Solyc12g044740.2.1 Solyc12g044740.2 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IGI Arabidopsis.org
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity ISS Arabidopsis.org
MF GO:0005516 calmodulin binding IDA Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
CC GO:0009506 plasmodesma IDA Arabidopsis.org
BP GO:0009640 photomorphogenesis RCA Arabidopsis.org
BP GO:0016567 protein ubiquitination RCA Arabidopsis.org
BP GO:0016571 histone methylation RCA Arabidopsis.org
BP GO:0016579 protein deubiquitination RCA Arabidopsis.org
BP GO:0016579 protein deubiquitination TAS Arabidopsis.org
BP GO:0045893 positive regulation of transcription, DNA-templated RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 25 73
IPR001394 Peptidase_C19_UCH 105 475
No external refs found!