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  5. Nbi_g12342

Nbi_g12342


Description : component *(COX6a) of cytochrome c oxidase complex & original description: none


Gene families : OG0004027 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g12342
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AT4G37830 No alias cytochrome c oxidase-related 0.06 OrthoFinder output from all 47 species
Adi_g013980 No alias component *(COX6a) of cytochrome c oxidase complex &... 0.02 OrthoFinder output from all 47 species
Adi_g125198 No alias component *(COX6a) of cytochrome c oxidase complex &... 0.03 OrthoFinder output from all 47 species
Aev_g12411 No alias component *(COX6a) of cytochrome c oxidase complex &... 0.03 OrthoFinder output from all 47 species
Ala_g00719 No alias component *(COX6a) of cytochrome c oxidase complex &... 0.03 OrthoFinder output from all 47 species
Als_g08629 No alias component *(COX6a) of cytochrome c oxidase complex &... 0.03 OrthoFinder output from all 47 species
Aop_g16712 No alias component *(COX6a) of cytochrome c oxidase complex &... 0.1 OrthoFinder output from all 47 species
Cba_g37748 No alias component *(COX6a) of cytochrome c oxidase complex &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.137 No alias Cellular respiration.oxidative... 0.02 OrthoFinder output from all 47 species
Cre12.g537450 No alias Cellular respiration.oxidative... 0.02 OrthoFinder output from all 47 species
Dac_g09195 No alias component *(COX6a) of cytochrome c oxidase complex &... 0.03 OrthoFinder output from all 47 species
Dcu_g42667 No alias component *(COX6a) of cytochrome c oxidase complex &... 0.03 OrthoFinder output from all 47 species
LOC_Os03g56190.1 LOC_Os03g56190 component COX6a of cytochrome c oxidase complex 0.02 OrthoFinder output from all 47 species
MA_9548380g0010 DRT102 component COX6a of cytochrome c oxidase complex 0.03 OrthoFinder output from all 47 species
Mp1g07110.1 No alias component COX6a of cytochrome c oxidase complex 0.04 OrthoFinder output from all 47 species
Msp_g11974 No alias component *(COX6a) of cytochrome c oxidase complex &... 0.04 OrthoFinder output from all 47 species
Pp3c5_3360V3.1 Pp3c5_3360 cytochrome c oxidase-related 0.02 OrthoFinder output from all 47 species
Pp3c6_25050V3.1 Pp3c6_25050 cytochrome c oxidase-related 0.04 OrthoFinder output from all 47 species
Solyc02g091880.4.1 Solyc02g091880 component COX6a of cytochrome c oxidase complex 0.05 OrthoFinder output from all 47 species
Spa_g00803 No alias component *(COX6a) of cytochrome c oxidase complex &... 0.12 OrthoFinder output from all 47 species
Tin_g03047 No alias component *(COX6a) of cytochrome c oxidase complex &... 0.05 OrthoFinder output from all 47 species
Zm00001e005827_P001 Zm00001e005827 component COX6a of cytochrome c oxidase complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005743 mitochondrial inner membrane IEA Interproscan
CC GO:0005751 mitochondrial respiratory chain complex IV IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) IEP HCCA
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001349 Cyt_c_oxidase_su6a 20 88
No external refs found!