AT1G49210


Description : RING/U-box superfamily protein


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G49210
Cluster HCCA cluster: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AT2G17730 NIP2 NEP-interacting protein 2 0.03 Gene family
AT3G18773 No alias RING/U-box superfamily protein 0.04 Gene family
LOC_Os01g53500 Os01g0736600 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_1143g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_69343g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc04g081890.1.1 Solyc04g081890.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc06g064440.3.1 Solyc06g064440.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Solyc08g076830.1.1 Solyc08g076830.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc11g010330.2.1 Solyc11g010330.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d002621 GRMZM2G068128 No description available 0.04 Gene family
Zm00001d016682 GRMZM5G860214 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d016837 GRMZM2G108085 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d023966 No alias 2.2.1.5 major CHO metabolism.degradation.sucrose.Susy... 0.03 Gene family
Zm00001d031880 No alias No description available 0.02 Gene family
Zm00001d037943 GRMZM2G340444 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IDA Arabidopsis.org
MF GO:0008270 zinc ion binding ISS Arabidopsis.org
BP GO:0016567 protein ubiquitination IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 134 177
No external refs found!