AT1G49040 (SCD1)


Aliases : SCD1

Description : stomatal cytokinesis defective / SCD1 protein (SCD1)


Gene families : OG_01_0002377 (Gene family) Phylogenetic Tree(s): OG0002377_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G49040
Cluster HCCA cluster: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001574.10 No alias No description available 0.02 Gene family
GSVIVT01008260001 No alias 31.2 cell.division Encodes soluble protein containing... 0.09 Gene family
LOC_Os01g39380 Os01g0575500 31.2 cell.division Encodes soluble protein containing... 0.11 Gene family
Smo118822 PACid_15411603 31.2 cell.division Encodes soluble protein containing... 0.04 Gene family
Solyc03g119650.3.1 Solyc03g119650.3 31.2 cell.division Encodes soluble protein containing... 0.03 Gene family
Zm00001d044274 GRMZM2G074572 31.2 cell.division Encodes soluble protein containing... 0.16 Gene family

Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization RCA Arabidopsis.org
BP GO:0000911 cytokinesis by cell plate formation IMP Arabidopsis.org
BP GO:0000911 cytokinesis by cell plate formation RCA Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0009825 multidimensional cell growth IMP Arabidopsis.org
BP GO:0010235 guard mother cell cytokinesis IMP Arabidopsis.org
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 1012 1048
IPR001680 WD40_repeat 834 883
IPR001680 WD40_repeat 893 925
IPR001680 WD40_repeat 930 966
IPR001680 WD40_repeat 1053 1089
IPR001194 cDENN_dom 123 304
IPR005113 uDENN_dom 35 103
No external refs found!