AT1G48850 (EMB1144)


Aliases : EMB1144

Description : chorismate synthase, putative / 5-enolpyruvylshikimate-3-phosphate phospholyase, putative


Gene families : OG_01_0003986 (Gene family) Phylogenetic Tree(s): OG0003986_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G48850
Cluster HCCA cluster: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020610.108 No alias 13.1.6.1.7 amino acid metabolism.synthesis.aromatic... 0.02 Gene family
Cre03.g145747 No alias 13.1.6.1.7 amino acid metabolism.synthesis.aromatic... 0.02 Gene family
GSVIVT01016288001 No alias 13.1.6.1.7 amino acid metabolism.synthesis.aromatic... 0.1 Gene family
Smo173197 PACid_15412640 No description available 0.02 Gene family
Solyc04g049350.3.1 Solyc04g049350.3 13.1.6.1.7 amino acid metabolism.synthesis.aromatic... 0.05 Gene family
Zm00001d028477 GRMZM2G164562 13.1.6.1.7 amino acid metabolism.synthesis.aromatic... 0.06 Gene family

Type GO Term Name Evidence Source
CC GO:0005730 nucleolus IDA Arabidopsis.org
BP GO:0006499 N-terminal protein myristoylation RCA Arabidopsis.org
BP GO:0006865 amino acid transport RCA Arabidopsis.org
BP GO:0009073 aromatic amino acid family biosynthetic process TAS Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
CC GO:0009536 plastid IDA Arabidopsis.org
CC GO:0009570 chloroplast stroma IDA Arabidopsis.org
BP GO:0009611 response to wounding RCA Arabidopsis.org
BP GO:0009793 embryo development ending in seed dormancy NAS Arabidopsis.org
BP GO:0009805 coumarin biosynthetic process RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000453 Chorismate_synth 59 406
No external refs found!