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  5. Nbi_g12157

Nbi_g12157 (FBW2)


Aliases : FBW2

Description : substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0000527 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000527_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Nbi_g12157

Target Alias Description ECC score Gene Family Method Actions
AT4G08980 FBW2 F-BOX WITH WD-40 2 0.02 OrthoFinder output from all 47 species
LOC_Os02g21240.1 LOC_Os02g21240 Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os11g41860.1 LOC_Os11g41860 Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Sam_g11159 No alias substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sam_g13010 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species
Solyc01g088240.4.1 Solyc01g088240 component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
Solyc08g006940.4.1 Solyc08g006940 F-box protein SKIP19 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc08g013750.3.1 Solyc08g013750 F-box protein SKIP19 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g52157 SKIP1 substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species
Tin_g45831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006415 translational termination IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 117 158
No external refs found!