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Nbi_g12055


Description : regulatory RNA helicase *(RH20/RH30) of virus replication & original description: none


Gene families : OG0000636 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000636_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Nbi_g12055

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00064p00050700 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.U2-type-intron-specific... 0.01 OrthoFinder output from all 47 species
Adi_g057398 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene15248.t1 ATDRH1, DRH1,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene39785.t1 Aspi01Gene39785 regulatory RNA helicase *(RH20/RH30) of virus... 0.01 OrthoFinder output from all 47 species
Dac_g12501 ATDRH1, DRH1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01032442001 ATDRH1, DRH1 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Nbi_g14167 ATDRH1, DRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g38769 ATDRH1, DRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62014 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015640 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0077.g017597 ATDRH1, DRH1 not classified & original description: CDS=159-3038 0.01 OrthoFinder output from all 47 species
Smo441099 ATDRH1, DRH1 DEAD-box ATP-dependent RNA helicase 46 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc12g044860.3.1 Solyc12g044860 DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 153 322
IPR001650 Helicase_C 360 469
No external refs found!