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  5. Nbi_g12028

Nbi_g12028


Description : not classified & original description: none


Gene families : OG0003541 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0003541_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g12028
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
Aop_g06497 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Cba_g36416 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0030688 preribosome, small subunit precursor IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 47 217
IPR025313 DUF4217 427 483
IPR001650 Helicase_C 271 384
No external refs found!