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  5. Nbi_g11896

Nbi_g11896


Description : not classified & original description: none


Gene families : OG0004233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004233_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g11896

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00244850 evm_27.TU.AmTr_v1... LIMR family protein At3g08930 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT5G01460 No alias LMBR1-like membrane protein 0.05 OrthoFinder output from all 47 species
Aev_g02363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38689 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g46989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g02814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os06g03760.1 LOC_Os06g03760 LIMR family protein Os06g0128200 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Mp5g20730.1 No alias LIMR family protein At3g08930 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g13114 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g04456 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g15699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029882_P001 Zm00001e029882 LIMR family protein Os06g0128200 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0015858 nucleoside transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1901642 nucleoside transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR006876 LMBR1-like_membr_prot 282 491
IPR006876 LMBR1-like_membr_prot 10 260
No external refs found!