AT1G43850 (SEU)


Aliases : SEU

Description : SEUSS transcriptional co-regulator


Gene families : OG_01_0001209 (Gene family) Phylogenetic Tree(s): OG0001209_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G43850
Cluster HCCA cluster: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01010616001 No alias 35.2 not assigned.unknown SEUSS-like 2 (SLK2) BEST... 0.05 Gene family
MA_12796g0010 No alias 27.3.99 RNA.regulation of transcription.unclassified... 0.04 Gene family
MA_28020g0010 No alias 35.2 not assigned.unknown SEUSS-like 2 (SLK2) BEST... 0.04 Gene family
Smo437711 PACid_15420468 27.3.99 RNA.regulation of transcription.unclassified... 0.02 Gene family
Solyc03g026190.3.1 Solyc03g026190.3 35.2 not assigned.unknown SEUSS-like 2 (SLK2) BEST... 0.03 Gene family
Solyc06g059750.3.1 Solyc06g059750.3 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.06 Gene family
Solyc06g059760.3.1 Solyc06g059760.3 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.07 Gene family
Zm00001d035990 GRMZM2G099187 35.2 not assigned.unknown SEUSS-like 2 (SLK2) BEST... 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IDA Arabidopsis.org
MF GO:0003712 transcription coregulator activity IMP Arabidopsis.org
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0007275 multicellular organism development IMP Arabidopsis.org
BP GO:0009909 regulation of flower development IGI Arabidopsis.org
BP GO:0042744 hydrogen peroxide catabolic process RCA Arabidopsis.org
MF GO:0046982 protein heterodimerization activity IPI Arabidopsis.org
BP GO:0048467 gynoecium development IMP Arabidopsis.org
BP GO:0048481 plant ovule development IMP Arabidopsis.org
MF GO:0060090 molecular adaptor activity IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR029005 LIM-bd/SEUSS 309 563
No external refs found!