AT1G43160 (RAP2.6)


Aliases : RAP2.6

Description : related to AP2 6


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G43160
Cluster HCCA cluster: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AT4G17490 ERF-6-6, ERF6, ATERF6 ethylene responsive element binding factor 6 0.03 Gene family
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.04 Gene family
AT4G34410 RRTF1 redox responsive transcription factor 1 0.03 Gene family
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
Cre14.g620500 No alias No description available 0.02 Gene family
GSVIVT01018271001 No alias No description available 0.03 Gene family
GSVIVT01021098001 No alias No description available 0.02 Gene family
GSVIVT01021146001 No alias No description available 0.05 Gene family
GSVIVT01028314001 No alias No description available 0.02 Gene family
GSVIVT01034563001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
GSVIVT01036389001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os01g54890 Os01g0752500 No description available 0.03 Gene family
LOC_Os01g64790 Os01g0868000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
LOC_Os02g42585 Os02g0638650 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os02g43820 Os02g0655200 No description available 0.02 Gene family
LOC_Os02g52670 Os02g0764700 No description available 0.03 Gene family
LOC_Os02g54050 Os02g0781300 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os03g08460 Os03g0182800 No description available 0.02 Gene family
LOC_Os03g08470 Os03g0183000 No description available 0.03 Gene family
LOC_Os03g60120 Os03g0815800 No description available 0.03 Gene family
LOC_Os04g32620 Os04g0398000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os04g46220 Os04g0546800 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os04g55520 Os04g0648900 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os04g57340 Os04g0669200 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os05g49700 Os05g0572000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os06g40150 Os06g0604000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os06g47590 Os06g0691100 No description available 0.02 Gene family
LOC_Os07g22730 Os07g0410300 No description available 0.04 Gene family
LOC_Os11g06770 Os11g0168500 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_10266433g0010 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
MA_10434101g0020 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_132427g0010 No alias No description available 0.03 Gene family
MA_2040g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_225124g0010 No alias No description available 0.02 Gene family
MA_23847g0010 No alias No description available 0.03 Gene family
MA_30120g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_66742g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_9260020g0010 No alias No description available 0.03 Gene family
Smo409196 PACid_15422590 No description available 0.02 Gene family
Smo73155 PACid_15404551 No description available 0.03 Gene family
Solyc02g077370.1.1 Solyc02g077370.1 No description available 0.02 Gene family
Solyc02g077840.1.1 Solyc02g077840.1 No description available 0.02 Gene family
Solyc03g005510.2.1 Solyc03g005510.2 No description available 0.03 Gene family
Solyc03g093610.1.1 Solyc03g093610.1 No description available 0.03 Gene family
Solyc03g117230.1.1 Solyc03g117230.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc04g051360.3.1 Solyc04g051360.3 No description available 0.04 Gene family
Solyc04g071770.3.1 Solyc04g071770.3 No description available 0.03 Gene family
Solyc04g078640.2.1 Solyc04g078640.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Solyc05g052030.1.1 Solyc05g052030.1 No description available 0.03 Gene family
Solyc06g053240.3.1 Solyc06g053240.3 No description available 0.04 Gene family
Solyc06g063070.3.1 Solyc06g063070.3 No description available 0.02 Gene family
Solyc06g068360.3.1 Solyc06g068360.3 No description available 0.02 Gene family
Solyc06g068830.2.1 Solyc06g068830.2 No description available 0.05 Gene family
Solyc08g008305.1.1 Solyc08g008305.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc08g078170.1.1 Solyc08g078170.1 No description available 0.02 Gene family
Solyc09g066360.1.1 Solyc09g066360.1 No description available 0.02 Gene family
Solyc10g050960.2.1 Solyc10g050960.2 No description available 0.02 Gene family
Solyc10g050970.1.1 Solyc10g050970.1 No description available 0.03 Gene family
Solyc12g042210.2.1 Solyc12g042210.2 No description available 0.04 Gene family
Zm00001d002762 GRMZM2G055180 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
Zm00001d005892 GRMZM2G138396 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d016616 GRMZM2G016434 No description available 0.05 Gene family
Zm00001d017462 GRMZM2G466044 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d019734 GRMZM2G123119 No description available 0.03 Gene family
Zm00001d026191 GRMZM2G080516 No description available 0.03 Gene family
Zm00001d029940 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d038216 GRMZM2G481668 No description available 0.03 Gene family
Zm00001d038585 GRMZM2G020150 No description available 0.03 Gene family
Zm00001d042593 GRMZM2G307152 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d042717 GRMZM2G149756 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d045204 GRMZM2G301860 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d052167 GRMZM2G173771 No description available 0.03 Gene family
Zm00001d053195 GRMZM2G076896 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003677 DNA binding TAS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity TAS Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005634 nucleus ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
BP GO:0006970 response to osmotic stress IEP Arabidopsis.org
BP GO:0009409 response to cold IEP Arabidopsis.org
BP GO:0009414 response to water deprivation IEP Arabidopsis.org
BP GO:0009611 response to wounding IEP Arabidopsis.org
BP GO:0009611 response to wounding RCA Arabidopsis.org
BP GO:0009620 response to fungus RCA Arabidopsis.org
BP GO:0009651 response to salt stress IMP Arabidopsis.org
BP GO:0009651 response to salt stress IEP Arabidopsis.org
BP GO:0009658 chloroplast organization IMP Arabidopsis.org
BP GO:0009695 jasmonic acid biosynthetic process RCA Arabidopsis.org
BP GO:0009737 response to abscisic acid IEP Arabidopsis.org
BP GO:0009751 response to salicylic acid IEP Arabidopsis.org
BP GO:0009753 response to jasmonic acid IEP Arabidopsis.org
BP GO:0009753 response to jasmonic acid RCA Arabidopsis.org
BP GO:0034605 cellular response to heat IEP Arabidopsis.org
BP GO:0045893 positive regulation of transcription, DNA-templated IDA Arabidopsis.org
BP GO:0045893 positive regulation of transcription, DNA-templated IMP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 60 109
No external refs found!