AT1G43080


Description : Pectin lyase-like superfamily protein


Gene families : OG_01_0000381 (Gene family) Phylogenetic Tree(s): OG0000381_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G43080
Cluster HCCA cluster: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Solyc07g044870.3.1 Solyc07g044870.3 10.6.3 cell wall.degradation.pectate lyases and... 0.01 Gene family

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity ISS Arabidopsis.org
CC GO:0005576 extracellular region ISM Arabidopsis.org
BP GO:0005975 carbohydrate metabolic process ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 64 390
No external refs found!