AMTR_s00007p00200160 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00007.174

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL11 component


Gene families : OG_01_0001738 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001738_tree ,
OG_02_0001636 (LandPlants) Phylogenetic Tree(s): OG_02_0001636_tree ,
OG_03_0001883 (SeedPlants) Phylogenetic Tree(s): OG_03_0001883_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00007p00200160
Cluster HCCA: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
AT2G42740 RPL16A ribosomal protein large subunit 16A 0.04 Archaeplastida
AT3G58700 No alias Ribosomal L5P family protein 0.07 Archaeplastida
AT4G18730 RPL16B ribosomal protein L16B 0.13 Archaeplastida
AT5G45775 No alias Ribosomal L5P family protein 0.1 Archaeplastida
Cpa|evm.model.tig00020610.38 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 Archaeplastida
Cre01.g027000 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.17 Archaeplastida
GSVIVT01020743001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 Archaeplastida
GSVIVT01021244001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 Archaeplastida
Gb_08546 No alias component RPL11 of LSU proteome component 0.05 Archaeplastida
LOC_Os01g10820.1 No alias component RPL11 of LSU proteome component 0.09 Archaeplastida
LOC_Os02g14059.1 No alias component RPL11 of LSU proteome component 0.03 Archaeplastida
LOC_Os05g11710.1 No alias component RPL11 of LSU proteome component 0.12 Archaeplastida
LOC_Os06g35730.1 No alias component RPL11 of LSU proteome component 0.13 Archaeplastida
MA_57785g0010 No alias 60S ribosomal protein L11-1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_74060g0010 No alias component RPL11 of LSU proteome component 0.06 Archaeplastida
MA_86694g0010 No alias component RPL11 of LSU proteome component 0.13 Archaeplastida
Mp2g24740.1 No alias component RPL11 of LSU proteome component 0.12 Archaeplastida
Mp6g18870.1 No alias component RPL11 of LSU proteome component 0.07 Archaeplastida
Pp3c11_8070V3.1 No alias ribosomal protein L16B 0.08 Archaeplastida
Pp3c1_7710V3.1 No alias ribosomal protein L16B 0.11 Archaeplastida
Pp3c27_2260V3.1 No alias Ribosomal L5P family protein 0.12 Archaeplastida
Pp3c2_33280V3.1 No alias ribosomal protein L16B 0.03 Archaeplastida
Pp3c5_3870V3.1 No alias Ribosomal L5P family protein 0.11 Archaeplastida
Pp3c7_20160V3.1 No alias ribosomal protein large subunit 16A 0.09 Archaeplastida
Smo444767 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 Archaeplastida
Solyc02g086240.3.1 No alias component RPL11 of LSU proteome component 0.09 Archaeplastida
Solyc07g055230.4.1 No alias component RPL11 of LSU proteome component 0.07 Archaeplastida
Solyc10g007980.3.1 No alias component RPL11 of LSU proteome component 0.12 Archaeplastida
Solyc12g010930.2.1 No alias component RPL11 of LSU proteome component 0.1 Archaeplastida
Zm00001e014363_P001 No alias no hits & (original description: none) 0.09 Archaeplastida
Zm00001e024913_P001 No alias component RPL11 of LSU proteome component 0.13 Archaeplastida
Zm00001e026886_P003 No alias component RPL11 of LSU proteome component 0.09 Archaeplastida
Zm00001e037255_P001 No alias component RPL11 of LSU proteome component 0.09 Archaeplastida
AT2G42740 RPL16A ribosomal protein large subunit 16A 0.04 LandPlants
AT3G58700 No alias Ribosomal L5P family protein 0.06 LandPlants
AT4G18730 RPL16B ribosomal protein L16B 0.12 LandPlants
AT5G45775 No alias Ribosomal L5P family protein 0.1 LandPlants
GSVIVT01020743001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 LandPlants
GSVIVT01021244001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 LandPlants
Gb_08546 No alias component RPL11 of LSU proteome component 0.05 LandPlants
LOC_Os01g10820.1 No alias component RPL11 of LSU proteome component 0.09 LandPlants
LOC_Os02g14059.1 No alias component RPL11 of LSU proteome component 0.03 LandPlants
LOC_Os05g11710.1 No alias component RPL11 of LSU proteome component 0.12 LandPlants
LOC_Os06g35730.1 No alias component RPL11 of LSU proteome component 0.13 LandPlants
MA_74060g0010 No alias component RPL11 of LSU proteome component 0.04 LandPlants
MA_86694g0010 No alias component RPL11 of LSU proteome component 0.11 LandPlants
Mp2g24740.1 No alias component RPL11 of LSU proteome component 0.12 LandPlants
Mp6g18870.1 No alias component RPL11 of LSU proteome component 0.07 LandPlants
Pp3c11_8070V3.1 No alias ribosomal protein L16B 0.07 LandPlants
Pp3c1_7710V3.1 No alias ribosomal protein L16B 0.09 LandPlants
Pp3c27_2260V3.1 No alias Ribosomal L5P family protein 0.09 LandPlants
Pp3c2_33280V3.1 No alias ribosomal protein L16B 0.03 LandPlants
Pp3c5_3870V3.1 No alias Ribosomal L5P family protein 0.1 LandPlants
Pp3c7_20160V3.1 No alias ribosomal protein large subunit 16A 0.09 LandPlants
Smo444767 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 LandPlants
Solyc02g086240.3.1 No alias component RPL11 of LSU proteome component 0.09 LandPlants
Solyc07g055230.4.1 No alias component RPL11 of LSU proteome component 0.07 LandPlants
Solyc10g007980.3.1 No alias component RPL11 of LSU proteome component 0.12 LandPlants
Solyc12g010930.2.1 No alias component RPL11 of LSU proteome component 0.1 LandPlants
Zm00001e014363_P001 No alias no hits & (original description: none) 0.09 LandPlants
Zm00001e024913_P001 No alias component RPL11 of LSU proteome component 0.12 LandPlants
Zm00001e026886_P003 No alias component RPL11 of LSU proteome component 0.08 LandPlants
Zm00001e037255_P001 No alias component RPL11 of LSU proteome component 0.07 LandPlants
AT2G42740 RPL16A ribosomal protein large subunit 16A 0.04 SeedPlants
AT3G58700 No alias Ribosomal L5P family protein 0.06 SeedPlants
AT4G18730 RPL16B ribosomal protein L16B 0.12 SeedPlants
AT5G45775 No alias Ribosomal L5P family protein 0.1 SeedPlants
GSVIVT01020743001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 SeedPlants
GSVIVT01021244001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 SeedPlants
Gb_08546 No alias component RPL11 of LSU proteome component 0.05 SeedPlants
LOC_Os01g10820.1 No alias component RPL11 of LSU proteome component 0.09 SeedPlants
LOC_Os02g14059.1 No alias component RPL11 of LSU proteome component 0.03 SeedPlants
LOC_Os05g11710.1 No alias component RPL11 of LSU proteome component 0.12 SeedPlants
LOC_Os06g35730.1 No alias component RPL11 of LSU proteome component 0.13 SeedPlants
MA_74060g0010 No alias component RPL11 of LSU proteome component 0.04 SeedPlants
MA_86694g0010 No alias component RPL11 of LSU proteome component 0.11 SeedPlants
Solyc02g086240.3.1 No alias component RPL11 of LSU proteome component 0.09 SeedPlants
Solyc07g055230.4.1 No alias component RPL11 of LSU proteome component 0.07 SeedPlants
Solyc10g007980.3.1 No alias component RPL11 of LSU proteome component 0.12 SeedPlants
Solyc12g010930.2.1 No alias component RPL11 of LSU proteome component 0.08 SeedPlants
Zm00001e014363_P001 No alias no hits & (original description: none) 0.07 SeedPlants
Zm00001e024913_P001 No alias component RPL11 of LSU proteome component 0.12 SeedPlants
Zm00001e026886_P003 No alias component RPL11 of LSU proteome component 0.08 SeedPlants
Zm00001e037255_P001 No alias component RPL11 of LSU proteome component 0.07 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002132 Ribosomal_L5 9 62
IPR002132 Ribosomal_L5 66 165
No external refs found!