AT1G35680


Description : Ribosomal protein L21


Gene families : OG_01_0001783 (Gene family) Phylogenetic Tree(s): OG0001783_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G35680
Cluster HCCA cluster: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Cre06.g299000 No alias No description available 0.23 Gene family
Cre09.g388550 No alias No description available 0.01 Gene family
GSVIVT01026890001 No alias 29.2.1.1.1.2.21 protein.synthesis.ribosomal... 0.31 Gene family
LOC_Os02g15900 Os02g0259600 29.2.1.1.1.2.21 protein.synthesis.ribosomal... 0.2 Gene family
LOC_Os05g48410 Os05g0557800 29.2.1.1.1.2.21 protein.synthesis.ribosomal... 0.02 Gene family
Solyc06g065390.3.1 Solyc06g065390.3 29.2.1.1.1.2.21 protein.synthesis.ribosomal... 0.29 Gene family
Zm00001d016072 GRMZM2G018403 29.2.1.1.1.2.21 protein.synthesis.ribosomal... 0.27 Gene family
Zm00001d053377 GRMZM2G054149 29.2.1.1.1.2.21 protein.synthesis.ribosomal... 0.13 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome ISS Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005840 ribosome ISS Arabidopsis.org
BP GO:0006364 rRNA processing RCA Arabidopsis.org
BP GO:0006412 translation ISS Arabidopsis.org
BP GO:0009409 response to cold IEP Arabidopsis.org
BP GO:0009409 response to cold RCA Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
CC GO:0009570 chloroplast stroma IDA Arabidopsis.org
BP GO:0009658 chloroplast organization IMP Arabidopsis.org
BP GO:0009793 embryo development ending in seed dormancy IMP Arabidopsis.org
BP GO:0009902 chloroplast relocation RCA Arabidopsis.org
CC GO:0009941 chloroplast envelope IDA Arabidopsis.org
BP GO:0010027 thylakoid membrane organization IMP Arabidopsis.org
BP GO:0010027 thylakoid membrane organization RCA Arabidopsis.org
BP GO:0010207 photosystem II assembly RCA Arabidopsis.org
BP GO:0035304 regulation of protein dephosphorylation RCA Arabidopsis.org
BP GO:0042742 defense response to bacterium RCA Arabidopsis.org
BP GO:0042793 plastid transcription RCA Arabidopsis.org
BP GO:0045893 positive regulation of transcription, DNA-templated RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR028909 L21p-like 101 201
No external refs found!