Description : Ribosomal protein S13/S18 family

Gene families : OG_01_0002586 (Gene family) Phylogenetic Tree(s): OG0002586_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G34030
Cluster HCCA cluster: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Cre06.g272950 No alias protein.synthesis.ribosomal... 0.34 Gene family
GSVIVT01017975001 No alias protein.synthesis.ribosomal... 0.2 Gene family
GSVIVT01034582001 No alias protein.synthesis.ribosomal... 0.1 Gene family
LOC_Os03g58050 Os03g0794700 protein.synthesis.ribosomal... 0.27 Gene family
LOC_Os07g07709 Os07g0173501 protein.synthesis.ribosomal... 0.04 Gene family
MA_10429265g0010 No alias protein.synthesis.ribosomal... 0.07 Gene family
MA_10431843g0010 No alias protein.synthesis.ribosomal... 0.03 Gene family
Smo267619 PACid_15412728 No description available 0.13 Gene family
Solyc03g078290.3.1 Solyc03g078290.3 protein.synthesis.ribosomal... 0.23 Gene family
Solyc06g073370.3.1 Solyc06g073370.3 protein.synthesis.ribosomal... 0.23 Gene family
Solyc11g005680.2.1 Solyc11g005680.2 protein.synthesis.ribosomal... 0.11 Gene family
Zm00001d013086 GRMZM2G130544 protein.synthesis.ribosomal... 0.28 Gene family
Zm00001d034422 GRMZM2G178341 protein.synthesis.ribosomal... 0.32 Gene family

Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation RCA
MF GO:0003735 structural constituent of ribosome ISS
MF GO:0005515 protein binding IPI
CC GO:0005618 cell wall IDA
CC GO:0005737 cytoplasm ISM
CC GO:0005774 vacuolar membrane IDA
CC GO:0005886 plasma membrane IDA
BP GO:0006412 translation ISS
CC GO:0009506 plasmodesma IDA
CC GO:0015935 small ribosomal subunit ISS
CC GO:0016020 membrane IDA
CC GO:0022626 cytosolic ribosome IDA
CC GO:0022627 cytosolic small ribosomal subunit IDA
BP GO:0042254 ribosome biogenesis IBA
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001892 Ribosomal_S13 14 142
No external refs found!