Nbi_g11581 (RPT4A)

Aliases : RPT4A

Description : regulatory component *(RPT4) of 26S proteasome & original description: none

Gene families : OG0004670 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004670_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g11581
Cluster	HCCA: Cluster_9

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00083p00095580	evm_27.TU.AmTr_v1...	Protein degradation.26S proteasome.regulatory...	0.02	OrthoFinder output from all 47 species
Aop_g08467	No alias	regulatory component *(RPT4) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Dcu_g05442	RPT4A	regulatory component *(RPT4) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
Tin_g16778	RPT4A	regulatory component *(RPT4) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	175	308
IPR041569	AAA_lid_3	331	373
IPR032501	Prot_ATP_ID_OB_C	62	117

External Links

No external refs found!