Nbi_g11537


Description : not classified & original description: none


Gene families : OG0002839 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002839_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g11537
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Aev_g19734 PDS3, PDS, PDE226 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000655.47 TZ, THI4, THI1 No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001302.9 PDE181, ZDS, SPC1 No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020734.51 No alias 15-cis-phytoene desaturase, chloroplastic/chromoplastic... 0.01 OrthoFinder output from all 47 species
Cre13.g587500 No alias Phytoene dehydrogenase, chloroplastic/chromoplastic... 0.02 OrthoFinder output from all 47 species
Dde_g01530 PDS3, PDS, PDE226 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g13429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34904 PDS3, PDS, PDE226 not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_135340g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g18160.1 PDS3, PDS, PDE226 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g03292 PDS3, PDS, PDE226 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05186 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo74261 PDS3, PDS, PDE226 15-cis-phytoene desaturase, chloroplastic/chromoplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 60 512
No external refs found!