AT1G33120


Description : Ribosomal protein L6 family


Gene families : OG_01_0002371 (Gene family) Phylogenetic Tree(s): OG0002371_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G33120
Cluster HCCA cluster: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001532.12 No alias 29.2.1.2.2.9 protein.synthesis.ribosomal... 0.01 Gene family
GSVIVT01038670001 No alias 29.2.1.2.2.9 protein.synthesis.ribosomal... 0.03 Gene family
Zm00001d045578 GRMZM2G084739 29.2.1.2.2.9 protein.synthesis.ribosomal... 0.08 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome ISS Arabidopsis.org
CC GO:0005730 nucleolus IDA Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005773 vacuole IDA Arabidopsis.org
CC GO:0005774 vacuolar membrane IDA Arabidopsis.org
CC GO:0005829 cytosol IDA Arabidopsis.org
CC GO:0005886 plasma membrane IDA Arabidopsis.org
BP GO:0006412 translation ISS Arabidopsis.org
CC GO:0009506 plasmodesma IDA Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
CC GO:0015934 large ribosomal subunit ISS Arabidopsis.org
CC GO:0016020 membrane IDA Arabidopsis.org
CC GO:0022626 cytosolic ribosome IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR020040 Ribosomal_L6_a/b-dom 102 181
IPR020040 Ribosomal_L6_a/b-dom 12 90
No external refs found!