Nbi_g11528 (ATGCN5, GCN5)

Aliases : ATGCN5, GCN5

Description : not classified & original description: none

Gene families : OG0003045 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003045_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g11528

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00247660	ATGCN5, GCN5,...	ABC transporter F family member 5 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AT5G64840	ATGCN5, GCN5	general control non-repressible 5	0.03	OrthoFinder output from all 47 species
Adi_g057121	ATGCN5, GCN5	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aev_g12591	ATGCN5, GCN5	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Als_g16234	ATGCN5, GCN5	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g02291	ATGCN5, GCN5	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g07329	ATGCN5, GCN5	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Azfi_s0168.g054635	ATGCN5, GCN5	not classified & original description: CDS=239-2245	0.04	OrthoFinder output from all 47 species
Cba_g38272	ATGCN5, GCN5	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.29G008900.1	ATGCN5, GCN5,...	not classified & original description: pacid=50624672...	0.08	OrthoFinder output from all 47 species
Cre06.g265100	ATGCN5, GCN5	ABC transporter F family member 5 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Cre06.g271850	ATGCN5, GCN5	ABC transporter F family member 5 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Dac_g12683	ATGCN5, GCN5	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Dde_g07651	ATGCN5, GCN5	not classified & original description: none	0.05	OrthoFinder output from all 47 species
GSVIVT01022235001	ATGCN5, GCN5	ABC transporter F family member 5 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Gb_01082	ATGCN5, GCN5	ABC transporter F family member 5 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
LOC_Os11g39020.1	ATGCN5, GCN5,...	ABC transporter F family member 5 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
Len_g13114	ATGCN5, GCN5	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Len_g58557	ATGCN5, GCN5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g07903	ATGCN5, GCN5	not classified & original description: none	0.04	OrthoFinder output from all 47 species
MA_10437027g0010	ATGCN5, GCN5	ABC transporter F family member 5 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Msp_g14610	ATGCN5, GCN5	not classified & original description: none	0.1	OrthoFinder output from all 47 species
Ore_g30372	ATGCN5, GCN5	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g15434	ATGCN5, GCN5	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Sam_g19383	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc04g051800.3.1	ATGCN5, GCN5,...	ABC transporter F family member 5 OS=Arabidopsis...	0.06	OrthoFinder output from all 47 species
Spa_g18685	ATGCN5, GCN5	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Zm00001e011297_P001	ATGCN5, GCN5,...	ABC transporter F family member 5 OS=Arabidopsis...	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
BP	GO:0016226	iron-sulfur cluster assembly	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	HCCA
MF	GO:0042586	peptide deformylase activity	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032781	ABC_tran_Xtn	351	436
IPR003439	ABC_transporter-like_ATP-bd	137	312
IPR003439	ABC_transporter-like_ATP-bd	466	596

External Links

No external refs found!

Nbi_g11528 (ATGCN5, GCN5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation