Nbi_g11504 (PRPL11)


Aliases : PRPL11

Description : component *(uL11c) of large plastid ribosomal-subunit proteome & original description: none


Gene families : OG0003431 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0003431_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g11504

Target Alias Description ECC score Gene Family Method Actions
Ala_g12058 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 39 species
Ala_g30583 No alias not classified & original description: none 0.04 OrthoFinder output from all 39 species
Als_g00538 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 39 species
Aop_g01017 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.13 OrthoFinder output from all 39 species
Aspi01Gene51098.t1 PRPL11, Aspi01Gene51098 component *(uL11c) of large plastid ribosomal-subunit... 0.01 OrthoFinder output from all 39 species
Azfi_s0591.g078746 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 39 species
Cba_g10687 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.01 OrthoFinder output from all 39 species
Dac_g28507 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 39 species
Dde_g08872 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 39 species
Len_g25437 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 39 species
Mp7g12110.1 PRPL11 component psRPL11 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 39 species
Pir_g17849 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 39 species
Pir_g63460 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Pp3c12_19370V3.1 PRPL11, Pp3c12_19370 plastid ribosomal protein l11 0.01 OrthoFinder output from all 39 species
Ppi_g00505 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 39 species
Ppi_g31170 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Sacu_v1.1_s0122.g021434 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 39 species
Spa_g16220 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.13 OrthoFinder output from all 39 species
Tin_g17431 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004418 hydroxymethylbilane synthase activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0010206 photosystem II repair IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030091 protein repair IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0035596 methylthiotransferase activity IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0050497 alkylthioltransferase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR020783 Ribosomal_L11_C 137 205
IPR020784 Ribosomal_L11_N 75 132
No external refs found!