AT1G32640 (ATMYC2, MYC2,...)


Aliases : ATMYC2, MYC2, RD22BP1, JIN1, ZBF1, JAI1

Description : Basic helix-loop-helix (bHLH) DNA-binding family protein


Gene families : OG_01_0001633 (Gene family) Phylogenetic Tree(s): OG0001633_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G32640
Cluster HCCA cluster: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01013156001 No alias 29.4 protein.postranslational modification Encodes a... 0.04 Gene family
Solyc08g005050.3.1 Solyc08g005050.3 29.4 protein.postranslational modification Encodes a... 0.02 Gene family
Solyc08g076930.1.1 Solyc08g076930.1 29.4 protein.postranslational modification Encodes a... 0.06 Gene family
Solyc08g083170.1.1 Solyc08g083170.1 No description available 0.03 Gene family
Solyc10g009270.3.1 Solyc10g009270.3 No description available 0.03 Gene family
Solyc10g009290.1.1 Solyc10g009290.1 No description available 0.03 Gene family
Zm00001d030028 GRMZM2G001930 29.4 protein.postranslational modification Encodes a... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IDA Arabidopsis.org
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006568 tryptophan metabolic process IMP Arabidopsis.org
BP GO:0006568 tryptophan metabolic process IEP Arabidopsis.org
BP GO:0006612 protein targeting to membrane RCA Arabidopsis.org
BP GO:0009269 response to desiccation IEP Arabidopsis.org
BP GO:0009611 response to wounding IEP Arabidopsis.org
BP GO:0009611 response to wounding RCA Arabidopsis.org
BP GO:0009611 response to wounding TAS Arabidopsis.org
BP GO:0009620 response to fungus RCA Arabidopsis.org
BP GO:0009694 jasmonic acid metabolic process RCA Arabidopsis.org
BP GO:0009695 jasmonic acid biosynthetic process RCA Arabidopsis.org
BP GO:0009737 response to abscisic acid IEP Arabidopsis.org
BP GO:0009738 abscisic acid-activated signaling pathway RCA Arabidopsis.org
BP GO:0009753 response to jasmonic acid IMP Arabidopsis.org
BP GO:0009753 response to jasmonic acid RCA Arabidopsis.org
BP GO:0009759 indole glucosinolate biosynthetic process IMP Arabidopsis.org
BP GO:0009759 indole glucosinolate biosynthetic process IEP Arabidopsis.org
BP GO:0009863 salicylic acid mediated signaling pathway RCA Arabidopsis.org
BP GO:0009867 jasmonic acid mediated signaling pathway IMP Arabidopsis.org
BP GO:0009867 jasmonic acid mediated signaling pathway RCA Arabidopsis.org
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP Arabidopsis.org
BP GO:0009963 positive regulation of flavonoid biosynthetic process RCA Arabidopsis.org
BP GO:0010200 response to chitin IEP Arabidopsis.org
BP GO:0010363 regulation of plant-type hypersensitive response RCA Arabidopsis.org
BP GO:0043069 negative regulation of programmed cell death RCA Arabidopsis.org
BP GO:0043619 regulation of transcription from RNA polymerase II promoter in response to oxidative stress IMP Arabidopsis.org
BP GO:0045893 positive regulation of transcription, DNA-templated IDA Arabidopsis.org
BP GO:0048364 root development IMP Arabidopsis.org
BP GO:0051090 regulation of DNA-binding transcription factor activity IMP Arabidopsis.org
BP GO:2000068 regulation of defense response to insect IMP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 452 497
IPR025610 MYC/MYB_N 68 252
No external refs found!