AT1G32415


Description : pentatricopeptide (PPR) repeat-containing protein


Gene families : OG_01_0006634 (Gene family) Phylogenetic Tree(s): OG0006634_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G32415
Cluster HCCA cluster: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01016874001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
LOC_Os05g24150 Os05g0307200 No description available 0.05 Gene family
MA_10430355g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc07g009220.2.1 Solyc07g009220.2 No description available 0.04 Gene family
Zm00001d022394 GRMZM2G326263 No description available 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Arabidopsis.org
CC GO:0005739 mitochondrion ISM Arabidopsis.org
BP GO:0008150 biological_process ND Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 430 474
IPR002885 Pentatricopeptide_repeat 136 169
IPR002885 Pentatricopeptide_repeat 261 301
IPR002885 Pentatricopeptide_repeat 532 580
IPR002885 Pentatricopeptide_repeat 230 258
IPR002885 Pentatricopeptide_repeat 608 628
IPR002885 Pentatricopeptide_repeat 80 108
IPR002885 Pentatricopeptide_repeat 370 396
IPR002885 Pentatricopeptide_repeat 401 429
IPR002885 Pentatricopeptide_repeat 170 199
No external refs found!