AT1G30330 (ARF6)


Aliases : ARF6

Description : auxin response factor 6


Gene families : OG_01_0000037 (Gene family) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G30330
Cluster HCCA cluster: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AT1G35240 ARF20 auxin response factor 20 0.03 Gene family
GSVIVT01015035001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.01 Gene family
LOC_Os02g04810 Os02g0141100 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
LOC_Os05g48870 Os05g0563400 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
MA_10199543g0020 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.01 Gene family
MA_10431695g0010 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Smo117217 PACid_15403898 No description available 0.02 Gene family
Solyc12g006340.2.1 Solyc12g006340.2 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.01 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
BP GO:0009733 response to auxin IMP Arabidopsis.org
BP GO:0009855 determination of bilateral symmetry RCA Arabidopsis.org
BP GO:0009886 post-embryonic animal morphogenesis RCA Arabidopsis.org
BP GO:0009887 animal organ morphogenesis RCA Arabidopsis.org
BP GO:0009908 flower development IGI Arabidopsis.org
BP GO:0009909 regulation of flower development RCA Arabidopsis.org
BP GO:0010014 meristem initiation RCA Arabidopsis.org
BP GO:0010051 xylem and phloem pattern formation RCA Arabidopsis.org
BP GO:0010073 meristem maintenance RCA Arabidopsis.org
BP GO:0048439 flower morphogenesis RCA Arabidopsis.org
BP GO:0048481 plant ovule development RCA Arabidopsis.org
BP GO:0048507 meristem development RCA Arabidopsis.org
BP GO:0048519 negative regulation of biological process RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 127 228
IPR010525 Auxin_resp 253 336
IPR033389 AUX/IAA_dom 782 883
No external refs found!