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Nbi_g11042 (ATSDX1, VTE1)


Aliases : ATSDX1, VTE1

Description : tocopherol cyclase *(VTE1/TC) & original description: none


Gene families : OG0003844 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003844_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g11042

Target Alias Description ECC score Gene Family Method Actions
Adi_g010247 ATSDX1, VTE1 tocopherol cyclase *(VTE1/TC) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10633 ATSDX1, VTE1 tocopherol cyclase *(VTE1/TC) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01234 ATSDX1, VTE1 tocopherol cyclase *(VTE1/TC) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0057.g034381 ATSDX1, VTE1 tocopherol cyclase *(VTE1/TC) & original description:... 0.02 OrthoFinder output from all 47 species
Cba_g31580 ATSDX1, VTE1 tocopherol cyclase *(VTE1/TC) & original description: none 0.05 OrthoFinder output from all 47 species
MA_10437041g0020 ATSDX1, VTE1 Tocopherol cyclase, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0135.g022363 ATSDX1, VTE1 tocopherol cyclase *(VTE1/TC) & original description:... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0009976 tocopherol cyclase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR025893 Tocopherol_cyclase 86 441
No external refs found!