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  5. Nbi_g10952

Nbi_g10952 (EMB2729, BE1)


Aliases : EMB2729, BE1

Description : EC_2.4 glycosyltransferase & original description: none


Gene families : OG0001102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001102_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g10952

Target Alias Description ECC score Gene Family Method Actions
AT3G20440 EMB2729, BE1 Alpha amylase family protein 0.04 OrthoFinder output from all 47 species
Adi_g008953 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022934 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085558 SBE2.2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g39074 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05750 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18095 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.09G001300.1 EMB2729, BE1,... EC_2.4 glycosyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g07721 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g04438 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01037695001 EMB2729, BE1 Carbohydrate metabolism.starch... 0.04 OrthoFinder output from all 47 species
Lfl_g18393 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
MA_105471g0010 SBE2.2 1,4-alpha-glucan-branching enzyme 2-2,... 0.03 OrthoFinder output from all 47 species
Pir_g08439 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16543 No alias EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19444 No alias starch branching enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g00766 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0043169 cation binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR006047 Glyco_hydro_13_cat_dom 482 570
IPR004193 Glyco_hydro_13_N 168 230
IPR006048 A-amylase/branching_C 859 948
No external refs found!