Nbi_g10936 (MYB3R-1, ATMYB3R1,...)


Aliases : MYB3R-1, ATMYB3R1, PC-MYB1, MYB3R1, ATMYB3R-1

Description : R1R2R3-MYB transcription factor & original description: none


Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g10936
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00252990 AtMYB124,... RNA biosynthesis.transcriptional activation.MYB... 0.07 OrthoFinder output from all 47 species
AMTR_s00109p00061950 MYB3R-1,... RNA biosynthesis.transcriptional activation.MYB... 0.15 OrthoFinder output from all 47 species
AT2G39880 AtMYB25, MYB25 myb domain protein 25 0.03 OrthoFinder output from all 47 species
AT5G11510 AtMYB3R4, MYB3R-4 myb domain protein 3r-4 0.21 OrthoFinder output from all 47 species
Aev_g16421 MYB88, AtMYB88 MYB class-R2R3 transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14702 AtMYB124, MYB124, FLP MYB class-R2R3 transcription factor & original description: none 0.19 OrthoFinder output from all 47 species
Als_g15763 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27407 ATMYB3R5, MYB3R-5 R1R2R3-MYB transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47836 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g57490 MYB3R-3, AtMYB3R3 R1R2R3-MYB transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g10604 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09729 ATMYB3R5, MYB3R-5 R1R2R3-MYB transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12966 MYB88, AtMYB88 MYB class-R2R3 transcription factor & original description: none 0.13 OrthoFinder output from all 47 species
Aspi01Gene32034.t1 AtMYB124,... MYB class-R2R3 transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene47785.t1 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.12 OrthoFinder output from all 47 species
Azfi_s0145.g051658 MYB88, AtMYB88 MYB class-R2R3 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0179.g056258 MYB3R-1,... R1R2R3-MYB transcription factor & original description:... 0.09 OrthoFinder output from all 47 species
Azfi_s0390.g067689 MYB3R-1,... R1R2R3-MYB transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.13G051800.1 MYB88, AtMYB88,... MYB class-R2R3 transcription factor & original... 0.15 OrthoFinder output from all 47 species
Ceric.33G050100.1 MYB3R-1,... R1R2R3-MYB transcription factor & original description:... 0.11 OrthoFinder output from all 47 species
Ceric.39G017100.1 MYB88, AtMYB88,... MYB class-R2R3 transcription factor & original... 0.22 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020780.48 MYB3R-1,... RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder output from all 47 species
Cre02.g103450 MYB88, AtMYB88 RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder output from all 47 species
Cre07.g345350 MYBR1, MYB44,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Dac_g04675 AtMYB124, MYB124, FLP MYB class-R2R3 transcription factor & original description: none 0.12 OrthoFinder output from all 47 species
Dcu_g12641 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.2 OrthoFinder output from all 47 species
Ehy_g05787 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
GSVIVT01015370001 MYB3R-1,... RNA biosynthesis.transcriptional activation.MYB... 0.12 OrthoFinder output from all 47 species
GSVIVT01035663001 MYB3R-1,... RNA biosynthesis.transcriptional activation.MYB... 0.21 OrthoFinder output from all 47 species
LOC_Os01g12860.1 MYB3R-1,... transcription factor (MYB) 0.08 OrthoFinder output from all 47 species
LOC_Os12g13570.1 MYB3R-1,... transcription factor (MYB) 0.19 OrthoFinder output from all 47 species
Len_g16435 ATMYB3R5, MYB3R-5 R1R2R3-MYB transcription factor & original description: none 0.1 OrthoFinder output from all 47 species
Len_g27982 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
Len_g56915 MYB88, AtMYB88 MYB class-R2R3 transcription factor & original description: none 0.12 OrthoFinder output from all 47 species
Lfl_g18053 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
MA_10425867g0020 BW52, ATMYB52, MYB52 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Mp1g08640.1 MYB3R-1,... transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
Msp_g20543 ATMYB3R5, MYB3R-5 R1R2R3-MYB transcription factor & original description: none 0.18 OrthoFinder output from all 47 species
Msp_g44400 AtMYB124, MYB124, FLP MYB class-R2R3 transcription factor & original description: none 0.18 OrthoFinder output from all 47 species
Pp3c15_19246V3.1 AtMYB98, MYB98,... myb domain protein 3r-4 0.01 OrthoFinder output from all 47 species
Pp3c17_19947V3.1 AtMYB124,... myb domain protein 88 0.01 OrthoFinder output from all 47 species
Ppi_g08219 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.14 OrthoFinder output from all 47 species
Ppi_g12915 AtMYB124, MYB124, FLP MYB class-R2R3 transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015735 MYB3R-1,... R1R2R3-MYB transcription factor & original description:... 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0272.g027032 AtMYB124, MYB124, FLP MYB class-R2R3 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Solyc03g098270.1.1 LOF2, MYB105,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc08g068320.3.1 MYB3R-1,... transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
Solyc08g080580.4.1 MYB3R-1,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc11g071300.2.1 MYB3R-1,... transcription factor (MYB) 0.07 OrthoFinder output from all 47 species
Spa_g39449 AtMYB124, MYB124, FLP MYB class-R2R3 transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g12262 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.12 OrthoFinder output from all 47 species
Tin_g13864 AtMYB124, MYB124, FLP MYB class-R2R3 transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e014203_P004 AtMYB3R4,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e031356_P001 MYB3R-1,... transcription factor (MYB) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 103 149
IPR001005 SANT/Myb 155 197
IPR001005 SANT/Myb 51 97
No external refs found!