AT1G06170


Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG_01_0003579 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003579_tree ,
OG_02_0002485 (LandPlants) Phylogenetic Tree(s): OG_02_0002485_tree ,
OG_03_0003866 (SeedPlants) Phylogenetic Tree(s): OG_03_0003866_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G06170
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00183690 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.07 Archaeplastida
GSVIVT01011330001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.06 Archaeplastida
LOC_Os01g18870.1 No alias transcription factor (bHLH) 0.09 Archaeplastida
MA_1220g0010 No alias transcription factor (bHLH) 0.06 Archaeplastida
Pp3c5_20560V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c6_8660V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
Smo81013 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Solyc01g081090.2.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Solyc01g081100.3.1 No alias transcription factor (bHLH) 0.12 Archaeplastida
Zm00001e025435_P001 No alias transcription factor (bHLH) 0.06 Archaeplastida
AMTR_s00048p00183690 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.06 LandPlants
GSVIVT01011330001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 LandPlants
Gb_19452 No alias transcription factor (bHLH) 0.02 LandPlants
LOC_Os01g18870.1 No alias transcription factor (bHLH) 0.06 LandPlants
MA_1220g0010 No alias transcription factor (bHLH) 0.05 LandPlants
Pp3c5_20560V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 LandPlants
Pp3c6_8660V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 LandPlants
Smo81013 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 LandPlants
Solyc01g081090.2.1 No alias transcription factor (bHLH) 0.05 LandPlants
Solyc01g081100.3.1 No alias transcription factor (bHLH) 0.11 LandPlants
Zm00001e025435_P001 No alias transcription factor (bHLH) 0.04 LandPlants
AMTR_s00048p00183690 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.06 SeedPlants
GSVIVT01011330001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 SeedPlants
Gb_19452 No alias transcription factor (bHLH) 0.02 SeedPlants
MA_1220g0010 No alias transcription factor (bHLH) 0.03 SeedPlants
Solyc01g081090.2.1 No alias transcription factor (bHLH) 0.04 SeedPlants
Solyc01g081100.3.1 No alias transcription factor (bHLH) 0.11 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 220 261
No external refs found!