Nbi_g10774 (NRPD5, ATRPABC24.3,...)


Aliases : NRPD5, ATRPABC24.3, NRPB5, RPB5A

Description : component *(NRPE5) of RNA polymerase V complex & original description: none


Gene families : OG0003418 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0003418_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g10774

Target Alias Description ECC score Gene Family Method Actions
Tin_g09998 NRPD5,... component *(NRPE5) of RNA polymerase V complex &... 0.02 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 DNA-templated transcription IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000814 ESCRT II complex IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
InterPro domains Description Start Stop
IPR000783 RNA_pol_subH/Rpb5_C 136 208
IPR005571 RNA_pol_Rpb5_N 9 93
No external refs found!