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  5. Nbi_g10715

Nbi_g10715 (CHMP1A, VPS46.2)


Aliases : CHMP1A, VPS46.2

Description : associated protein of ESCRT-III complex *(VPS46/CHMP1) & original description: none


Gene families : OG0001221 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001221_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g10715

Target Alias Description ECC score Gene Family Method Actions
Ala_g34247 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.12 OrthoFinder output from all 47 species
Als_g06013 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.1 OrthoFinder output from all 47 species
Aop_g12020 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.14 OrthoFinder output from all 47 species
Aspi01Gene14066.t1 CHMP1A, VPS46.2,... associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.09 OrthoFinder output from all 47 species
Ceric.23G038900.1 CHMP1A, VPS46.2,... associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.07 OrthoFinder output from all 47 species
Dcu_g02598 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.11 OrthoFinder output from all 47 species
Gb_27834 CHMP1A, VPS46.2 VPS46/CHMP1 associated protein of ESCRT-III complex 0.03 OrthoFinder output from all 47 species
Len_g58527 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.09 OrthoFinder output from all 47 species
Msp_g08498 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.11 OrthoFinder output from all 47 species
Ppi_g16522 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002861 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.06 OrthoFinder output from all 47 species
Sam_g20146 No alias associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.11 OrthoFinder output from all 47 species
Spa_g44088 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.08 OrthoFinder output from all 47 species
Tin_g05400 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 14 171
No external refs found!