AT1G06040 (STO)


Aliases : STO

Description : B-box zinc finger family protein


Gene families : OG_01_0000461 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000461_tree ,
OG_02_0000694 (LandPlants) Phylogenetic Tree(s): OG_02_0000694_tree ,
OG_03_0006215 (SeedPlants) Phylogenetic Tree(s): OG_03_0006215_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G06040
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00182p00043350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01018818001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
GSVIVT01024173001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
LOC_Os02g39360.1 No alias transcription factor (BBX-DBB) 0.03 Archaeplastida
LOC_Os04g45690.1 No alias transcription factor (BBX-DBB) 0.05 Archaeplastida
LOC_Os09g35880.1 No alias transcription factor (BBX-DBB) 0.06 Archaeplastida
Mp5g05940.1 No alias transcription factor (BBX-DBB) 0.03 Archaeplastida
Pp3c17_14230V3.1 No alias light-regulated zinc finger protein 1 0.05 Archaeplastida
Pp3c7_5280V3.1 No alias B-box type zinc finger family protein 0.09 Archaeplastida
Solyc01g110370.4.1 No alias transcription factor (BBX-DBB) 0.09 Archaeplastida
Solyc06g073180.3.1 No alias transcription factor (BBX-DBB) 0.13 Archaeplastida
Zm00001e010221_P001 No alias transcription factor (BBX-DBB) 0.04 Archaeplastida
Zm00001e022915_P001 No alias transcription factor (BBX-DBB) 0.05 Archaeplastida
LOC_Os02g39360.1 No alias transcription factor (BBX-DBB) 0.02 LandPlants
LOC_Os04g45690.1 No alias transcription factor (BBX-DBB) 0.02 LandPlants
Pp3c17_14230V3.1 No alias light-regulated zinc finger protein 1 0.05 LandPlants
Solyc06g073180.3.1 No alias transcription factor (BBX-DBB) 0.12 LandPlants
Zm00001e022915_P001 No alias transcription factor (BBX-DBB) 0.04 LandPlants
AMTR_s00066p00204180 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 SeedPlants
LOC_Os02g39360.1 No alias transcription factor (BBX-DBB) 0.02 SeedPlants
Solyc06g073180.3.1 No alias transcription factor (BBX-DBB) 0.12 SeedPlants
Zm00001e007720_P001 No alias transcription factor (BBX-DBB) 0.02 SeedPlants
Zm00001e022915_P001 No alias transcription factor (BBX-DBB) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006096 glycolytic process RCA Interproscan
BP GO:0006833 water transport RCA Interproscan
BP GO:0006972 hyperosmotic response RCA Interproscan
BP GO:0007030 Golgi organization RCA Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
BP GO:0009266 response to temperature stimulus RCA Interproscan
BP GO:0009416 response to light stimulus IEP Interproscan
BP GO:0009640 photomorphogenesis IGI Interproscan
BP GO:0009651 response to salt stress IGI Interproscan
BP GO:0009651 response to salt stress RCA Interproscan
BP GO:0009737 response to abscisic acid RCA Interproscan
BP GO:0046686 response to cadmium ion RCA Interproscan
BP GO:0080167 response to karrikin IEP Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000315 Znf_B-box 55 95
No external refs found!