MA_529552g0010


Description : component RPS27a of SSU proteome


Gene families : OG_01_0000077 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000077_tree ,
OG_02_0000113 (LandPlants) Phylogenetic Tree(s): OG_02_0000113_tree ,
OG_03_0000087 (SeedPlants) Phylogenetic Tree(s): OG_03_0000087_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_529552g0010
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00094950 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.18 Archaeplastida
AMTR_s00040p00104050 evm_27.TU.AmTr_v1... Ubiquitin-60S ribosomal protein L40 OS=Nicotiana sylvestris 0.03 Archaeplastida
AMTR_s00095p00146440 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 Archaeplastida
AT1G23410 No alias Ribosomal protein S27a / Ubiquitin family protein 0.07 Archaeplastida
AT2G36170 No alias Ubiquitin supergroup;Ribosomal protein L40e 0.23 Archaeplastida
AT2G47110 UBQ6 ubiquitin 6 0.28 Archaeplastida
AT3G52590 UBQ1, EMB2167,... ubiquitin extension protein 1 0.3 Archaeplastida
AT3G62250 UBQ5 ubiquitin 5 0.29 Archaeplastida
Cpa|evm.model.tig00022075.50 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 Archaeplastida
Cre01.g007051 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.1 Archaeplastida
Cre06.g273600 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.29 Archaeplastida
GSVIVT01012906001 No alias Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana 0.16 Archaeplastida
GSVIVT01022543001 No alias Ubiquitin-40S ribosomal protein S27a OS=Solanum tuberosum 0.07 Archaeplastida
GSVIVT01028198001 No alias Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana 0.12 Archaeplastida
GSVIVT01033876001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 Archaeplastida
GSVIVT01038617001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.31 Archaeplastida
Gb_01257 No alias component RPL40 of LSU proteome component 0.03 Archaeplastida
Gb_15027 No alias component RPS27a of SSU proteome 0.21 Archaeplastida
Gb_40288 No alias component RPS27a of SSU proteome 0.17 Archaeplastida
Gb_41257 No alias component RPL40 of LSU proteome component 0.19 Archaeplastida
LOC_Os01g22490.1 No alias component RPS27a of SSU proteome 0.09 Archaeplastida
LOC_Os03g13170.1 No alias component RPL40 of LSU proteome component 0.09 Archaeplastida
LOC_Os05g06770.1 No alias component RPS27a of SSU proteome 0.09 Archaeplastida
LOC_Os09g39500.1 No alias component RPL40 of LSU proteome component 0.13 Archaeplastida
Mp7g12760.1 No alias component RPS27a of SSU proteome 0.16 Archaeplastida
Mp8g00780.1 No alias component RPL40 of LSU proteome component 0.25 Archaeplastida
Pp3c10_25270V3.1 No alias ubiquitin extension protein 1 0.2 Archaeplastida
Pp3c12_5640V3.1 No alias ubiquitin 6 0.22 Archaeplastida
Pp3c12_5760V3.1 No alias ubiquitin 6 0.25 Archaeplastida
Pp3c20_23170V3.1 No alias ubiquitin extension protein 1 0.27 Archaeplastida
Pp3c24_430V3.1 No alias ubiquitin extension protein 1 0.18 Archaeplastida
Pp3c3_25480V3.1 No alias ubiquitin extension protein 1 0.22 Archaeplastida
Pp3c4_11930V3.1 No alias Ubiquitin supergroup;Ribosomal protein L40e 0.16 Archaeplastida
Pp3c4_19000V3.1 No alias ubiquitin 6 0.3 Archaeplastida
Pp3c8_14230V3.1 No alias ubiquitin 6 0.16 Archaeplastida
Smo111605 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.14 Archaeplastida
Smo93613 No alias Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc01g068045.1.1 No alias component RPS27a of SSU proteome 0.16 Archaeplastida
Solyc01g096290.4.1 No alias no hits & (original description: none) 0.14 Archaeplastida
Solyc03g082570.4.1 No alias component RPL40 of LSU proteome component 0.25 Archaeplastida
Solyc08g008590.4.1 No alias component RPL40 of LSU proteome component 0.07 Archaeplastida
Solyc08g083120.3.1 No alias component RPL40 of LSU proteome component 0.27 Archaeplastida
Solyc12g098940.2.1 No alias component RPS27a of SSU proteome 0.12 Archaeplastida
Solyc12g099025.1.1 No alias component RPS27a of SSU proteome 0.13 Archaeplastida
Zm00001e000962_P001 No alias component RPL40 of LSU proteome component 0.13 Archaeplastida
Zm00001e000965_P001 No alias component RPL40 of LSU proteome component 0.02 Archaeplastida
Zm00001e003606_P001 No alias component RPS27a of SSU proteome 0.03 Archaeplastida
Zm00001e009474_P001 No alias component RPL40 of LSU proteome component 0.16 Archaeplastida
Zm00001e026237_P001 No alias component RPS27a of SSU proteome 0.22 Archaeplastida
Zm00001e028916_P001 No alias component RPS27a of SSU proteome 0.1 Archaeplastida
AMTR_s00017p00094950 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.16 LandPlants
AMTR_s00040p00104050 evm_27.TU.AmTr_v1... Ubiquitin-60S ribosomal protein L40 OS=Nicotiana sylvestris 0.03 LandPlants
AMTR_s00095p00146440 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 LandPlants
AT1G23410 No alias Ribosomal protein S27a / Ubiquitin family protein 0.07 LandPlants
AT2G36170 No alias Ubiquitin supergroup;Ribosomal protein L40e 0.21 LandPlants
AT2G47110 UBQ6 ubiquitin 6 0.25 LandPlants
AT3G52590 UBQ1, EMB2167,... ubiquitin extension protein 1 0.28 LandPlants
AT3G62250 UBQ5 ubiquitin 5 0.26 LandPlants
GSVIVT01012906001 No alias Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana 0.14 LandPlants
GSVIVT01022543001 No alias Ubiquitin-40S ribosomal protein S27a OS=Solanum tuberosum 0.06 LandPlants
GSVIVT01028198001 No alias Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana 0.08 LandPlants
GSVIVT01033876001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 LandPlants
GSVIVT01038617001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.29 LandPlants
Gb_01257 No alias component RPL40 of LSU proteome component 0.03 LandPlants
Gb_15027 No alias component RPS27a of SSU proteome 0.19 LandPlants
Gb_40288 No alias component RPS27a of SSU proteome 0.14 LandPlants
Gb_41257 No alias component RPL40 of LSU proteome component 0.16 LandPlants
LOC_Os01g22490.1 No alias component RPS27a of SSU proteome 0.07 LandPlants
LOC_Os03g13170.1 No alias component RPL40 of LSU proteome component 0.09 LandPlants
LOC_Os05g06770.1 No alias component RPS27a of SSU proteome 0.09 LandPlants
LOC_Os09g39500.1 No alias component RPL40 of LSU proteome component 0.13 LandPlants
Mp6g16040.1 No alias Ubiquitin-40S ribosomal protein S27a OS=Hordeum vulgare... 0.02 LandPlants
Mp7g12760.1 No alias component RPS27a of SSU proteome 0.15 LandPlants
Mp8g00780.1 No alias component RPL40 of LSU proteome component 0.24 LandPlants
Pp3c10_25270V3.1 No alias ubiquitin extension protein 1 0.18 LandPlants
Pp3c12_5640V3.1 No alias ubiquitin 6 0.19 LandPlants
Pp3c12_5760V3.1 No alias ubiquitin 6 0.21 LandPlants
Pp3c20_23170V3.1 No alias ubiquitin extension protein 1 0.24 LandPlants
Pp3c24_430V3.1 No alias ubiquitin extension protein 1 0.16 LandPlants
Pp3c3_25480V3.1 No alias ubiquitin extension protein 1 0.2 LandPlants
Pp3c4_11930V3.1 No alias Ubiquitin supergroup;Ribosomal protein L40e 0.14 LandPlants
Pp3c4_19000V3.1 No alias ubiquitin 6 0.27 LandPlants
Pp3c8_14230V3.1 No alias ubiquitin 6 0.15 LandPlants
Smo111605 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 LandPlants
Smo93613 No alias Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana 0.03 LandPlants
Solyc01g068045.1.1 No alias component RPS27a of SSU proteome 0.16 LandPlants
Solyc01g096290.4.1 No alias no hits & (original description: none) 0.13 LandPlants
Solyc03g082570.4.1 No alias component RPL40 of LSU proteome component 0.23 LandPlants
Solyc08g008590.4.1 No alias component RPL40 of LSU proteome component 0.06 LandPlants
Solyc08g083120.3.1 No alias component RPL40 of LSU proteome component 0.25 LandPlants
Solyc12g098940.2.1 No alias component RPS27a of SSU proteome 0.12 LandPlants
Solyc12g099025.1.1 No alias component RPS27a of SSU proteome 0.13 LandPlants
Zm00001e000962_P001 No alias component RPL40 of LSU proteome component 0.11 LandPlants
Zm00001e000965_P001 No alias component RPL40 of LSU proteome component 0.01 LandPlants
Zm00001e003606_P001 No alias component RPS27a of SSU proteome 0.01 LandPlants
Zm00001e009474_P001 No alias component RPL40 of LSU proteome component 0.14 LandPlants
Zm00001e026237_P001 No alias component RPS27a of SSU proteome 0.18 LandPlants
Zm00001e028916_P001 No alias component RPS27a of SSU proteome 0.09 LandPlants
AMTR_s00017p00094950 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.16 SeedPlants
AMTR_s00040p00104050 evm_27.TU.AmTr_v1... Ubiquitin-60S ribosomal protein L40 OS=Nicotiana sylvestris 0.03 SeedPlants
AMTR_s00095p00146440 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 SeedPlants
AT1G23410 No alias Ribosomal protein S27a / Ubiquitin family protein 0.07 SeedPlants
AT2G36170 No alias Ubiquitin supergroup;Ribosomal protein L40e 0.2 SeedPlants
AT2G47110 UBQ6 ubiquitin 6 0.25 SeedPlants
AT3G52590 UBQ1, EMB2167,... ubiquitin extension protein 1 0.27 SeedPlants
AT3G62250 UBQ5 ubiquitin 5 0.26 SeedPlants
GSVIVT01012906001 No alias Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana 0.12 SeedPlants
GSVIVT01022543001 No alias Ubiquitin-40S ribosomal protein S27a OS=Solanum tuberosum 0.04 SeedPlants
GSVIVT01028198001 No alias Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana 0.07 SeedPlants
GSVIVT01033876001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 SeedPlants
GSVIVT01038617001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.26 SeedPlants
Gb_01257 No alias component RPL40 of LSU proteome component 0.03 SeedPlants
Gb_15027 No alias component RPS27a of SSU proteome 0.18 SeedPlants
Gb_40288 No alias component RPS27a of SSU proteome 0.14 SeedPlants
Gb_41257 No alias component RPL40 of LSU proteome component 0.16 SeedPlants
LOC_Os01g22490.1 No alias component RPS27a of SSU proteome 0.07 SeedPlants
LOC_Os03g13170.1 No alias component RPL40 of LSU proteome component 0.09 SeedPlants
LOC_Os05g06770.1 No alias component RPS27a of SSU proteome 0.08 SeedPlants
LOC_Os09g39500.1 No alias component RPL40 of LSU proteome component 0.13 SeedPlants
Solyc01g068045.1.1 No alias component RPS27a of SSU proteome 0.16 SeedPlants
Solyc01g096290.4.1 No alias no hits & (original description: none) 0.13 SeedPlants
Solyc03g082570.4.1 No alias component RPL40 of LSU proteome component 0.21 SeedPlants
Solyc08g008590.4.1 No alias component RPL40 of LSU proteome component 0.06 SeedPlants
Solyc08g083120.3.1 No alias component RPL40 of LSU proteome component 0.24 SeedPlants
Solyc12g098940.2.1 No alias component RPS27a of SSU proteome 0.11 SeedPlants
Solyc12g099025.1.1 No alias component RPS27a of SSU proteome 0.13 SeedPlants
Zm00001e000962_P001 No alias component RPL40 of LSU proteome component 0.11 SeedPlants
Zm00001e000965_P001 No alias component RPL40 of LSU proteome component 0.01 SeedPlants
Zm00001e003606_P001 No alias component RPS27a of SSU proteome 0.01 SeedPlants
Zm00001e009474_P001 No alias component RPL40 of LSU proteome component 0.13 SeedPlants
Zm00001e026237_P001 No alias component RPS27a of SSU proteome 0.18 SeedPlants
Zm00001e028916_P001 No alias component RPS27a of SSU proteome 0.09 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 3 74
IPR002906 Ribosomal_S27a 102 147
No external refs found!