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  5. Nbi_g10536

Nbi_g10536


Description : E3 ubiquitin ligase & original description: none


Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g10536

Target Alias Description ECC score Gene Family Method Actions
Adi_g008851 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.39G041400.1 Ceric.39G041400 E3 ubiquitin ligase & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g17220 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g20355 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17216 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30245 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 157 202
IPR022143 DUF3675 209 325
No external refs found!