AT1G05805

Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Gene families : OG_01_0000051 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000051_tree ,
OG_02_0000668 (LandPlants) Phylogenetic Tree(s): OG_02_0000668_tree ,
OG_03_0000736 (SeedPlants) Phylogenetic Tree(s): OG_03_0000736_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G05805
Cluster	HCCA: Cluster_121

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00013p00245920	evm_27.TU.AmTr_v1...	External stimuli response.light.UV-A/blue...	0.03	Archaeplastida
AT2G18300	No alias	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	0.03	Archaeplastida
AT4G02590	UNE12	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	0.05	Archaeplastida
AT4G34530	CIB1	cryptochrome-interacting basic-helix-loop-helix 1	0.04	Archaeplastida
AT5G50915	No alias	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	0.04	Archaeplastida
GSVIVT01008628001	No alias	External stimuli response.light.UV-A/blue...	0.03	Archaeplastida
GSVIVT01011873001	No alias	External stimuli response.light.UV-A/blue...	0.03	Archaeplastida
GSVIVT01013553001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.07	Archaeplastida
GSVIVT01018094001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.05	Archaeplastida
GSVIVT01025313001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.04	Archaeplastida
GSVIVT01026056001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.03	Archaeplastida
GSVIVT01033356001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.03	Archaeplastida
Gb_22201	No alias	transcription factor (bHLH)	0.03	Archaeplastida
Gb_37017	No alias	transcription factor (bHLH)	0.03	Archaeplastida
LOC_Os02g39140.1	No alias	transcription factor (bHLH)	0.07	Archaeplastida
LOC_Os04g41229.1	No alias	transcription factor (bHLH)	0.02	Archaeplastida
LOC_Os09g31300.1	No alias	transcription factor (bHLH)	0.03	Archaeplastida
MA_120179g0010	No alias	transcription factor (bHLH)	0.03	Archaeplastida
MA_158362g0010	No alias	transcription factor (bHLH). transcriptional regulator (CIB)	0.03	Archaeplastida
MA_158850g0010	No alias	transcription factor (bHLH)	0.03	Archaeplastida
MA_50630g0010	No alias	transcription factor (bHLH)	0.03	Archaeplastida
MA_96671g0010	No alias	transcription factor (bHLH). transcriptional regulator (CIB)	0.05	Archaeplastida
Pp3c12_25990V3.1	No alias	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c15_4760V3.1	No alias	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c21_14114V3.1	No alias	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c6_9520V3.1	No alias	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	0.02	Archaeplastida
Smo444782	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.02	Archaeplastida
Solyc03g113560.4.1	No alias	transcription factor (bHLH)	0.03	Archaeplastida
Solyc04g005220.3.1	No alias	transcription factor (bHLH). transcriptional regulator (CIB)	0.03	Archaeplastida
Solyc04g007300.4.1	No alias	transcription factor (bHLH). transcriptional regulator (CIB)	0.03	Archaeplastida
Solyc06g083170.3.1	No alias	transcription factor (bHLH). transcriptional regulator (CIB)	0.04	Archaeplastida
Zm00001e010060_P001	No alias	transcription factor (bHLH)	0.03	Archaeplastida
Zm00001e010138_P002	No alias	transcription factor (bHLH). transcriptional regulator (CIB)	0.04	Archaeplastida
Zm00001e023327_P001	No alias	transcription factor (bHLH). transcriptional regulator (CIB)	0.03	Archaeplastida
Zm00001e034528_P001	No alias	transcription factor (bHLH)	0.04	Archaeplastida
Zm00001e034658_P003	No alias	transcription factor (bHLH). transcriptional regulator (CIB)	0.03	Archaeplastida
GSVIVT01013553001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.05	LandPlants
GSVIVT01025313001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.03	LandPlants
GSVIVT01026056001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.03	LandPlants
GSVIVT01033356001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.03	LandPlants
Gb_37017	No alias	transcription factor (bHLH)	0.03	LandPlants
LOC_Os02g39140.1	No alias	transcription factor (bHLH)	0.07	LandPlants
LOC_Os04g41229.1	No alias	transcription factor (bHLH)	0.02	LandPlants
LOC_Os09g31300.1	No alias	transcription factor (bHLH)	0.03	LandPlants
Pp3c12_25990V3.1	No alias	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	0.02	LandPlants
Pp3c15_4760V3.1	No alias	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	0.02	LandPlants
Pp3c21_14114V3.1	No alias	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	0.02	LandPlants
Zm00001e034528_P001	No alias	transcription factor (bHLH)	0.04	LandPlants
Zm00001e035219_P001	No alias	transcription factor (bHLH)	0.02	LandPlants
AMTR_s00070p00149100	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.bHLH...	0.02	SeedPlants
GSVIVT01025313001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.02	SeedPlants
GSVIVT01026056001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.03	SeedPlants
GSVIVT01033356001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.03	SeedPlants
LOC_Os02g39140.1	No alias	transcription factor (bHLH)	0.05	SeedPlants
MA_66378g0010	No alias	no hits & (original description: none)	0.02	SeedPlants
Zm00001e035219_P001	No alias	transcription factor (bHLH)	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010119	regulation of stomatal movement	IDA	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011598	bHLH_dom	295	340

External Links

No external refs found!

AT1G05805

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation