AT1G21670


Description : LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40-like Beta Propeller (InterPro:IPR011659), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: DPP6 N-terminal domain-like protein (TAIR:AT1G21680.1); Has 8461 Blast hits to 5060 proteins in 1257 species: Archae - 79; Bacteria - 5567; Metazoa - 37; Fungi - 70; Plants - 117; Viruses - 0; Other Eukaryotes - 2591 (source: NCBI BLink).


Gene families : OG_01_0003178 (Gene family) Phylogenetic Tree(s): OG0003178_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G21670
Cluster HCCA cluster: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
LOC_Os07g44410 Os07g0638100 35.1 not assigned.no ontology tolB protein-related 0.02 Gene family

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Arabidopsis.org
CC GO:0005618 cell wall IDA Arabidopsis.org
CC GO:0009505 plant-type cell wall IDA Arabidopsis.org
BP GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011659 PD40 531 569
IPR011659 PD40 590 604
IPR011659 PD40 483 518
No external refs found!